RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 MTNR1BP49286 362 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 EEFSECP57772 596 aaKnown RBP2.99□□□□□ -1.93
LINC02540-201ENST00000455554 STRN3Q13033 797 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 TARDBPQ13148 414 aaKnown RBP eCLIP2.99□□□□□ -1.93
LINC02540-201ENST00000455554 TEDDM1Q5T9Z0 273 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 MIS18BP1Q6P0N0 1132 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 DDX46Q7L014 1031 aaKnown RBP2.99□□□□□ -1.93
LINC02540-201ENST00000455554 RNF180Q86T96 592 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 CHSY1Q86X52 802 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 UBR7Q8N806 425 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 KLHDC4Q8TBB5 520 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 PIGOQ8TEQ8 1089 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 RAB24Q969Q5 203 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 ASB2Q96Q27 587 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 CCM2LQ9NUG4 571 aaPredicted RBP2.99□□□□□ -1.93
LINC02540-201ENST00000455554 TDP1Q9NUW8 608 aa2.99□□□□□ -1.93
LINC02540-201ENST00000455554 ZBTB32Q9Y2Y4 487 aaPredicted RBP2.99□□□□□ -1.93
LINC02540-201ENST00000455554 E9PLN8 166 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 FGBP02675 491 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 CDK11BP21127 795 aaKnown RBP2.98□□□□□ -1.93
LINC02540-201ENST00000455554 GPR3P46089 330 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 PCID2Q5JVF3 399 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 RBM20Q5T481 1227 aaKnown RBP2.98□□□□□ -1.93
LINC02540-201ENST00000455554 ZNF618Q5T7W0 954 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 SLC30A10Q6XR72 485 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 WDR53Q7Z5U6 358 aaPredicted RBP2.98□□□□□ -1.93
LINC02540-201ENST00000455554 ACRBPQ8NEB7 543 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 IFI44Q8TCB0 444 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 NRG4Q8WWG1 115 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 FAM136AQ96C01 138 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 PPP1R10Q96QC0 940 aaKnown RBP2.98□□□□□ -1.93
LINC02540-201ENST00000455554 VKORC1Q9BQB6 163 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 C14orf119Q9NWQ9 140 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 INTUQ9ULD6 942 aa2.98□□□□□ -1.93
LINC02540-201ENST00000455554 FNDC1Q4ZHG4 1894 aaPredicted RBP2.98□□□□□ -1.93
LINC02540-201ENST00000455554 WDR17Q8IZU2 1322 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 SOAT2O75908 522 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 OAZ2O95190 189 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 TMEM191BP0C7N4 346 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 ITGALP20701 1170 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 LPOP22079 712 aaPredicted RBP2.97□□□□□ -1.93
LINC02540-201ENST00000455554 CD6P30203 668 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 CYP2C18P33260 490 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 WASP42768 502 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 THBS3P49746 956 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 GYS2P54840 703 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 HOXA4Q00056 320 aaPredicted RBP2.97□□□□□ -1.93
LINC02540-201ENST00000455554 CDC42EP1Q00587 391 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 TWIST1Q15672 202 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 KRTAP27-1Q3LI81 207 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 SHC4Q6S5L8 630 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 VCPIP1Q96JH7 1222 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 SLC2A13Q96QE2 648 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 SMOC2Q9H3U7 446 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 DLL3Q9NYJ7 618 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 GPR45Q9Y5Y3 372 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 CADPSQ9ULU8 1353 aa2.97□□□□□ -1.93
LINC02540-201ENST00000455554 ALPLP05186 524 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 ZNF280AP59817 542 aaPredicted RBP2.96□□□□□ -1.94
LINC02540-201ENST00000455554 CYP4F2P78329 520 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 HTRA4P83105 476 aaPredicted RBP2.96□□□□□ -1.94
LINC02540-201ENST00000455554 FAPQ12884 760 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 TAF2Q6P1X5 1199 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 GIMAP6Q6P9H5 292 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 NAPRTQ6XQN6 538 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 TRIM72Q6ZMU5 477 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 MIGA2Q7L4E1 593 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 FAM109AQ8N4B1 249 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 ZBTB8BQ8NAP8 495 aaPredicted RBP2.96□□□□□ -1.94
LINC02540-201ENST00000455554 PSD4Q8NDX1 1056 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.96□□□□□ -1.94
LINC02540-201ENST00000455554 C16orf52Q8NHV5 167 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 SCAMP4Q969E2 229 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 COQ8BQ96D53 544 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 ZC3H10Q96K80 434 aaKnown RBP2.96□□□□□ -1.94
LINC02540-201ENST00000455554 LYZL4Q96KX0 146 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 SERHLQ9NQF3 203 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 ETAA1Q9NY74 926 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 KLHL13Q9P2N7 655 aa2.96□□□□□ -1.94
LINC02540-201ENST00000455554 LY6G6EA0A0G2JKS1 128 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 PPM1DO15297 605 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 PDHA1P08559 390 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 ATP5F1P24539 256 aaPredicted RBP2.95□□□□□ -1.94
LINC02540-201ENST00000455554 NANOS2P60321 138 aaKnown RBP2.95□□□□□ -1.94
LINC02540-201ENST00000455554 GTF2H3Q13889 308 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 RAB39AQ14964 217 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 VPS53Q5VIR6 699 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 GADL1Q6ZQY3 521 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 LHFPL2Q6ZUX7 228 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 PDSS2Q86YH6 399 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 KRT78Q8N1N4 520 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 RBMXL3Q8N7X1 1067 aaKnown RBP2.95□□□□□ -1.94
LINC02540-201ENST00000455554 CYP2W1Q8TAV3 490 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 AHCYL2Q96HN2 611 aaKnown RBP2.95□□□□□ -1.94
LINC02540-201ENST00000455554 RITA1Q96K30 269 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 FAM118BQ9BPY3 351 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 MACROD1Q9BQ69 325 aa2.95□□□□□ -1.94
LINC02540-201ENST00000455554 ZNF277Q9NRM2 450 aaPredicted RBP2.95□□□□□ -1.94
LINC02540-201ENST00000455554 DUSP22Q9NRW4 184 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms