RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SCAMP3O14828 347 aaKnown RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 N4BP3O15049 544 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 SLC16A4O15374 487 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 CCL16O15467 120 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 HIP1RO75146 1068 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 ARAFP10398 606 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 LAMP2P13473 410 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 OR1D2P34982 312 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 NAMPTP43490 491 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 MAP2K3P46734 347 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 BRCC3P46736 316 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 CLCN5P51795 746 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 CLCNKBP51801 687 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 FANCCQ00597 558 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 SOX4Q06945 474 aaPredicted RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 RAD51AP2Q09MP3 1159 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 SEZ6Q53EL9 994 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 SPECC1Q5M775 1068 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 ATF7IP2Q5U623 682 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 CDCA2Q69YH5 1023 aaPredicted RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 CWF19L1Q69YN2 538 aaKnown RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 PSAPL1Q6NUJ1 521 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 CD300LGQ6UXG3 332 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 RSPO2Q6UXX9 243 aaPredicted RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 GET4Q7L5D6 327 aaPredicted RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 ASCL5Q7RTU5 278 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 KCNK18Q7Z418 384 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 GRASPQ7Z6J2 395 aaPredicted RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 FRMD5Q7Z6J6 570 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 CCNJLQ8IV13 435 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 ZBTB8OSQ8IWT0 167 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 C3orf58Q8NDZ4 430 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 CMASQ8NFW8 434 aaPredicted RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 ERMNQ8TAM6 284 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 PLD4Q96BZ4 506 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 ZBTB45Q96K62 511 aaPredicted RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 IFT74Q96LB3 600 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 FRMD6Q96NE9 622 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 PRRX2Q99811 253 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 LPIN3Q9BQK8 851 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 ADPGKQ9BRR6 497 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 LLPHQ9BRT6 129 aaKnown RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 TTPALQ9BTX7 342 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 RUSC1Q9BVN2 902 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 LACRTQ9GZZ8 138 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 C2orf40Q9H1Z8 148 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 PLEKHA4Q9H4M7 779 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 HCFC1R1Q9NWW0 138 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 FNIP2Q9P278 1114 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 IGSF9Q9P2J2 1179 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 STK39Q9UEW8 545 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 DUSP12Q9UNI6 340 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 TRIM33Q9UPN9 1127 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 PCDHGB7Q9Y5F8 929 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 CLUHO75153 1309 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 PDCD11Q14690 1871 aaKnown RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 SDK1Q7Z5N4 2213 aa5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 ZNF638Q14966 1978 aaKnown RBP5.15□□□□□ -1.59
GTF3C3-208ENST00000455546 F5P12259 2224 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 NPHP3-ACAD11A0A0J9YXS1 232 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 SMIM28A0A1B0GU29 152 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 TMEM238LA0A1B0GVL6 79 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 MEFVO15553 781 aaPredicted RBP5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 LRRN2O75325 713 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 B3GAT3O94766 335 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 C8AP07357 584 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 DCNP07585 359 aaKnown RBP5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 VSIG8P0DPA2 414 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 U2AF2P26368 475 aaKnown RBP eCLIP5.14□□□□□ -1.599e-7■■■■□ 23.5
GTF3C3-208ENST00000455546 ERCC5P28715 1186 aaPredicted RBP5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 TKTP29401 623 aaKnown RBP5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 CDC25BP30305 580 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 GSTT1P30711 240 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 NPTX2P47972 431 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 CDR1P51861 262 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 ARPP19P56211 112 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 GPC5P78333 572 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 SPAG1Q07617 926 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 PDIA5Q14554 519 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 PSMD5Q16401 504 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 UPP1Q16831 310 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 PPM1LQ5SGD2 360 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 AXDND1Q5T1B0 1012 aaPredicted RBP5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 LCE2CQ5TA81 110 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 MCTP1Q6DN14 999 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 RINT1Q6NUQ1 792 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 ELMSAN1Q6PJG2 1045 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 DCLRE1AQ6PJP8 1040 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 PARM1Q6UWI2 310 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 ALKAL1Q6UXT8 129 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 C1orf229Q6ZS94 237 aaPredicted RBP5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 C1orf186Q6ZWK4 172 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 NPAS3Q8IXF0 933 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 DAW1Q8N136 415 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 IGSF22Q8N9C0 903 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 DTWD2Q8NBA8 298 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 ITFG1Q8TB96 612 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 HDAC7Q8WUI4 952 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 ING5Q8WYH8 240 aa5.14□□□□□ -1.59
GTF3C3-208ENST00000455546 STAMQ92783 540 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms