RNA–Protein interactions for RNA: ENST00000455359.5

HMGXB4-204, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 1,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-204ENST00000455359 OSTM1Q86WC4 334 aa15.27■□□□□ 0.04
HMGXB4-204ENST00000455359 CRYBG2Q8N1P7 616 aa15.27■□□□□ 0.04
HMGXB4-204ENST00000455359 PPM1KQ8N3J5 372 aa15.27■□□□□ 0.04
HMGXB4-204ENST00000455359 OR10T2Q8NGX3 314 aa15.27■□□□□ 0.04
HMGXB4-204ENST00000455359 SLC22A17Q8WUG5 538 aa15.27■□□□□ 0.04
HMGXB4-204ENST00000455359 SYT15Q9BQS2 421 aa15.27■□□□□ 0.04
HMGXB4-204ENST00000455359 NT5C1AQ9BXI3 368 aa15.27■□□□□ 0.04
HMGXB4-204ENST00000455359 PLEKHA4Q9H4M7 779 aa15.27■□□□□ 0.04
HMGXB4-204ENST00000455359 CISHQ9NSE2 258 aa15.27■□□□□ 0.04
HMGXB4-204ENST00000455359 SIK3Q9Y2K2 1263 aa15.27■□□□□ 0.04
HMGXB4-204ENST00000455359 PCDHGC5Q9Y5F6 944 aa15.27■□□□□ 0.04
HMGXB4-204ENST00000455359 ATF2P15336 505 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 RPL17P18621 184 aaKnown RBP15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 CLCN4P51793 760 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 CDH8P55286 799 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 ROR1Q01973 937 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 HYAL1Q12794 435 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 KCNC3Q14003 757 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 SYCP1Q15431 976 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 UVSSAQ2YD98 709 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 KLHDC7AQ5VTJ3 777 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 PHLDB3Q6NSJ2 640 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 FAM171BQ6P995 826 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 ADGRD2Q7Z7M1 963 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 CASP10Q92851 521 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 FUBP3Q96I24 572 aaKnown RBP eCLIP15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 SDCBP2Q9H190 292 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 ABCB6Q9NP58 842 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 SIX2Q9NPC8 291 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 UBE2TQ9NPD8 197 aaPredicted RBP15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 DZANK1Q9NVP4 752 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 KIAA1257Q9ULG3 409 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 CNTN6Q9UQ52 1028 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 KIAA1671Q9BY89 1806 aa15.26■□□□□ 0.03
HMGXB4-204ENST00000455359 NLRC5Q86WI3 1866 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 ADAM12O43184 909 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 TGM5O43548 720 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 CPB1P15086 417 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 UCHL3P15374 230 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 PTPN1P18031 435 aaKnown RBP15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 ACO1P21399 889 aaKnown RBP15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 LMO2P25791 158 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 RAP1GAPP47736 663 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 NDST1P52848 882 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 CTC1Q2NKJ3 1217 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 DPY19L2P1Q6NXN4 242 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 SARM1Q6SZW1 724 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 C4orf50Q6ZRC1 276 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 CCDC149Q6ZUS6 474 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 RBM23Q86U06 439 aaKnown RBP15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 GAS2L3Q86XJ1 694 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 TCEAL8Q8IYN2 117 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 UBR7Q8N806 425 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 SPPL2BQ8TCT7 592 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 IQCDQ96DY2 449 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 PKMYT1Q99640 499 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 LSM14BQ9BX40 385 aaKnown RBP15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 RBSNQ9H1K0 784 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.25■□□□□ 0.033e-16■■■■■ 205
HMGXB4-204ENST00000455359 FBXW11Q9UKB1 542 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 HCFC2Q9Y5Z7 792 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 SCN1AP35498 2009 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 MYO7AQ13402 2215 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 PRRC2BQ5JSZ5 2229 aaKnown RBP15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 SZT2Q5T011 3432 aa15.25■□□□□ 0.03
HMGXB4-204ENST00000455359 WDR27A2RRH5 827 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 PER2O15055 1255 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 CSPG5O95196 566 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 PAEPP09466 180 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 PDGFRBP09619 1106 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 HOXB8P17481 243 aaPredicted RBP15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 CD58P19256 250 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 ELF1P32519 619 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 TUFMP49411 452 aaKnown RBP15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 ADAM15Q13444 863 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 CFAP221Q4G0U5 840 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 RRAGAQ7L523 313 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 PALB2Q86YC2 1186 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 ARHGEF19Q8IW93 802 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 B3GALNT2Q8NCR0 500 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 NEK11Q8NG66 645 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 MYCBPAPQ8TBZ2 947 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 WHAMMQ8TF30 809 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 ELMO3Q96BJ8 720 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 PABPC5Q96DU9 382 aaKnown RBP15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 TMEM176AQ96HP8 235 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 CEP295NLQ96MC4 621 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 PCMTD1Q96MG8 357 aaPredicted RBP15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 KREMEN1Q96MU8 473 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 NAP1L5Q96NT1 182 aaPredicted RBP15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 ARID3AQ99856 593 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 NAA15Q9BXJ9 866 aaKnown RBP15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 STK33Q9BYT3 514 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 EDEM3Q9BZQ6 932 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 PCDHB5Q9Y5E4 795 aa15.24■□□□□ 0.03
HMGXB4-204ENST00000455359 TEX33O43247 280 aa15.23■□□□□ 0.03
HMGXB4-204ENST00000455359 PAPLNO95428 1278 aa15.23■□□□□ 0.03
HMGXB4-204ENST00000455359 POU2F2P09086 479 aa15.23■□□□□ 0.03
HMGXB4-204ENST00000455359 ACAT1P24752 427 aaKnown RBP15.23■□□□□ 0.03
HMGXB4-204ENST00000455359 HOXA9P31269 272 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms