RNA–Protein interactions for RNA: ENST00000454822.5

RPE-216, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 2,130 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-216ENST00000454822 PCBP1Q15365 356 aaKnown RBP eCLIP9.37□□□□□ -0.91
RPE-216ENST00000454822 UAP1Q16222 522 aaPredicted RBP9.37□□□□□ -0.91
RPE-216ENST00000454822 PTPN20Q4JDL3 420 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 SGO2Q562F6 1265 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 NOTUMQ6P988 496 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 C3orf20Q8ND61 904 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 ARL8AQ96BM9 186 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 HEXIM2Q96MH2 286 aaKnown RBP9.37□□□□□ -0.91
RPE-216ENST00000454822 ZMAT2Q96NC0 199 aaKnown RBP9.37□□□□□ -0.91
RPE-216ENST00000454822 MCEEQ96PE7 176 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 APBA2Q99767 749 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 ZDHHC18Q9NUE0 388 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 DERAQ9Y315 318 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 HES2Q9Y543 173 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 TRIP11Q15643 1979 aa9.37□□□□□ -0.91
RPE-216ENST00000454822 TRIP12Q14669 1992 aaPredicted RBP9.36□□□□□ -0.91
RPE-216ENST00000454822 F8VP50 259 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 MICAL2O94851 1124 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 RALAP11233 206 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 VDRP11473 427 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 NDST1P52848 882 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 PLTPP55058 493 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 DHX9Q08211 1270 aaKnown RBP9.36□□□□□ -0.91
RPE-216ENST00000454822 INCA1Q0VD86 236 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 CRHR2Q13324 411 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 SNX1Q13596 522 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 ZBTB6Q15916 424 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 CNGA2Q16280 664 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 ATP13A4Q4VNC1 1196 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 ZDHHC24Q6UX98 284 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 CCDC50Q8IVM0 306 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 EXD1Q8NHP7 514 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 SOCS4Q8WXH5 440 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 SNX27Q96L92 541 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 HEMGNQ9BXL5 484 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 CHST7Q9NS84 486 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 GRHL1Q9NZI5 618 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 TJP2Q9UDY2 1190 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 LCMT1Q9UIC8 334 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 STRIP2Q9ULQ0 834 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 BARX2Q9UMQ3 279 aaPredicted RBP9.36□□□□□ -0.91
RPE-216ENST00000454822 PLAAQ9Y263 795 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 PTPN22Q9Y2R2 807 aa9.36□□□□□ -0.91
RPE-216ENST00000454822 GOLGA6CA6NDK9 693 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 SIGLEC16A6NMB1 481 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 H0YGN5 161 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 GOLGA8SH3BPF8 625 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 ECEL1O95672 775 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 KRT14P02533 472 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 GOLGA6DP0CG33 693 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 TCF4P15884 667 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 CTGFP29279 349 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 AXLP30530 894 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 GJC1P36383 396 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 RPL21P46778 160 aaKnown RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 YARSP54577 528 aaKnown RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 PSMC1P62191 440 aaKnown RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 MYO1EQ12965 1108 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 PIGHQ14442 188 aaPredicted RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 SNX17Q15036 470 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 FSCN1Q16658 493 aaKnown RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 TTMPQ5BVD1 217 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 LRRC38Q5VT99 294 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 ALKAL1Q6UXT8 129 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 TMC3Q7Z5M5 1100 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 ANKS1BQ7Z6G8 1248 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 RCOR2Q8IZ40 523 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 TMEM40Q8WWA1 233 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 SLCO2A1Q92959 643 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 RNF25Q96BH1 459 aaPredicted RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 CPXM1Q96SM3 734 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 FMO2Q99518 471 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 TXLNGYQ9BZA5 131 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 OSBPL8Q9BZF1 889 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 DCLK3Q9C098 648 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 GOLGA6AQ9NYA3 693 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 KIAA1257Q9ULG3 409 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.35□□□□□ -0.91
RPE-216ENST00000454822 R3HDM2Q9Y2K5 976 aaKnown RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 NFS1Q9Y697 457 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 C17orf102A2RUQ5 167 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 FAM155AB1AL88 458 aaPredicted RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 PPEF2O14830 753 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 PPFIA2O75334 1257 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 HMGCRP04035 888 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 ERBB2P04626 1255 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 KRT3P12035 628 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 AKAP5P24588 427 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 GBP1P32455 592 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 RFC1P35251 1148 aaPredicted RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 GPD2P43304 727 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 LMAN1P49257 510 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 PURAQ00577 322 aaKnown RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 KLF1Q13351 362 aaPredicted RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 MTMR3Q13615 1198 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 ZNF268Q14587 947 aaPredicted RBP9.35□□□□□ -0.91
RPE-216ENST00000454822 LRIG3Q6UXM1 1119 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 DPH6Q7L8W6 267 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 NME8Q8N427 588 aa9.35□□□□□ -0.91
RPE-216ENST00000454822 TTC39CQ8N584 583 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms