RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 UTP18Q9Y5J1 556 aaKnown RBP eCLIP29.96■■■□□ 2.39
SMARCC1-203ENST00000454240 P4HA1P13674 534 aa29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 LMO2P25791 158 aa29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 HOXA9P31269 272 aa29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 NOP14P78316 857 aaKnown RBP29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 KCNH2Q12809 1159 aa29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 SMAD2Q15796 467 aaKnown RBP29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 SLC39A12Q504Y0 691 aa29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 CYP26C1Q6V0L0 522 aa29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 SLC7A14Q8TBB6 771 aa29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 ZNF707Q96C28 371 aaPredicted RBP29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 PGLYRP2Q96PD5 576 aa29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 SMYD3Q9H7B4 428 aa29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 CYP4F11Q9HBI6 524 aa29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 FAM50BQ9Y247 325 aa29.95■■■□□ 2.39
SMARCC1-203ENST00000454240 MTMR11A4FU01 709 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 HCRTO43612 131 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 HNRNPA1P09651 372 aaKnown RBP eCLIP29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 ACAT1P24752 427 aaKnown RBP29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 PCSK1P29120 753 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 GNL1P36915 607 aaPredicted RBP29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 CDH8P55286 799 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 TSPY1Q01534 308 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 SMARCB1Q12824 385 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 INTS6LQ5JSJ4 861 aaKnown RBP29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 TJAP1Q5JTD0 557 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 PPM1LQ5SGD2 360 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 DCP1BQ8IZD4 617 aaKnown RBP29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 CCDC150Q8NCX0 1101 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 PKMYT1Q99640 499 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 PRKD2Q9BZL6 878 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 SDCBP2Q9H190 292 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 SNX25Q9H3E2 840 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 UTP3Q9NQZ2 479 aaKnown RBP eCLIP29.94■■■□□ 2.383e-6■■■■■ 284.9
SMARCC1-203ENST00000454240 CDH22Q9UJ99 828 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 NME7Q9Y5B8 376 aa29.94■■■□□ 2.38
SMARCC1-203ENST00000454240 P4HA2O15460 535 aa29.93■■■□□ 2.38
SMARCC1-203ENST00000454240 N4BP1O75113 896 aaKnown RBP29.93■■■□□ 2.38
SMARCC1-203ENST00000454240 CLSTN1O94985 981 aa29.93■■■□□ 2.38
SMARCC1-203ENST00000454240 IL9P15248 144 aa29.93■■■□□ 2.38
SMARCC1-203ENST00000454240 ASPAP45381 313 aa29.93■■■□□ 2.38
SMARCC1-203ENST00000454240 FAM114A1Q8IWE2 563 aa29.93■■■□□ 2.38
SMARCC1-203ENST00000454240 FAXDC2Q96IV6 333 aa29.93■■■□□ 2.38
SMARCC1-203ENST00000454240 BCO2Q9BYV7 579 aa29.93■■■□□ 2.38
SMARCC1-203ENST00000454240 DNAJC25Q9H1X3 360 aa29.93■■■□□ 2.38
SMARCC1-203ENST00000454240 TMLHEQ9NVH6 421 aa29.93■■■□□ 2.38
SMARCC1-203ENST00000454240 CDH9Q9ULB4 789 aa29.93■■■□□ 2.38
SMARCC1-203ENST00000454240 PRRG1O14668 218 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 AFPP02771 609 aaKnown RBP29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 ATAT1Q5SQI0 421 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 SCARA5Q6ZMJ2 495 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 CREBRFQ8IUR6 639 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 ATAD1Q8NBU5 361 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 OR6B3Q8NGW1 331 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 DOCK6Q96HP0 2047 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 RIPOR3Q96MK2 946 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 FUCA2Q9BTY2 467 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 NIF3L1Q9GZT8 377 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 CRISPLD1Q9H336 500 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 SAMSN1Q9NSI8 373 aaKnown RBP29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 HSFX1Q9UBD0 423 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 NFE2L3Q9Y4A8 694 aa29.92■■■□□ 2.38
SMARCC1-203ENST00000454240 DENND4AQ7Z401 1863 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 POU2F2P09086 479 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 PDGFRBP09619 1106 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 WEE2P0C1S8 567 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 MTHFRP42898 656 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 RAP1GAPP47736 663 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 DUSP4Q13115 394 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 CBX2Q14781 532 aaPredicted RBP29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 WDR44Q5JSH3 913 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 FAM171BQ6P995 826 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 C2orf15Q8WU43 125 aaKnown RBP29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 SYT15Q9BQS2 421 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 GTF3C4Q9UKN8 822 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 INSL5Q9Y5Q6 135 aa29.91■■■□□ 2.38
SMARCC1-203ENST00000454240 NFKBIBQ15653 356 aa29.9■■■□□ 2.38
SMARCC1-203ENST00000454240 NFE2Q16621 373 aaPredicted RBP29.9■■■□□ 2.38
SMARCC1-203ENST00000454240 SPPL2BQ8TCT7 592 aa29.9■■■□□ 2.38
SMARCC1-203ENST00000454240 SMG7Q92540 1137 aaKnown RBP29.9■■■□□ 2.38
SMARCC1-203ENST00000454240 NECTIN4Q96NY8 510 aa29.9■■■□□ 2.38
SMARCC1-203ENST00000454240 CYP3A43Q9HB55 503 aa29.9■■■□□ 2.38
SMARCC1-203ENST00000454240 PTPRDP23468 1912 aa29.89■■■□□ 2.38
SMARCC1-203ENST00000454240 MYBPHLA2RUH7 354 aa29.89■■■□□ 2.38
SMARCC1-203ENST00000454240 A8MXQ7 604 aa29.89■■■□□ 2.38
SMARCC1-203ENST00000454240 ATP2C2O75185 946 aa29.89■■■□□ 2.38
SMARCC1-203ENST00000454240 MTIF2P46199 727 aaKnown RBP29.89■■■□□ 2.38
SMARCC1-203ENST00000454240 CETN1Q12798 172 aa29.89■■■□□ 2.38
SMARCC1-203ENST00000454240 LMO3Q8TAP4 145 aa29.89■■■□□ 2.38
SMARCC1-203ENST00000454240 TATDN2Q93075 761 aa29.89■■■□□ 2.38
SMARCC1-203ENST00000454240 CRTAC1Q9NQ79 661 aa29.89■■■□□ 2.38
SMARCC1-203ENST00000454240 MAGEC2Q9UBF1 373 aaPredicted RBP29.89■■■□□ 2.38
SMARCC1-203ENST00000454240 SLC27A5Q9Y2P5 690 aa29.89■■■□□ 2.38
SMARCC1-203ENST00000454240 SYCE3A1L190 88 aa29.88■■■□□ 2.37
SMARCC1-203ENST00000454240 CCL16O15467 120 aa29.88■■■□□ 2.37
SMARCC1-203ENST00000454240 PSMC1P62191 440 aaKnown RBP29.88■■■□□ 2.37
SMARCC1-203ENST00000454240 ANO6Q4KMQ2 910 aa29.88■■■□□ 2.37
SMARCC1-203ENST00000454240 HSP90AA4PQ58FG1 418 aa29.88■■■□□ 2.37
SMARCC1-203ENST00000454240 TTC9BQ8N6N2 239 aa29.88■■■□□ 2.37
SMARCC1-203ENST00000454240 POMKQ9H5K3 350 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms