RNA–Protein interactions for RNA: ENST00000452859.6

SNX11-203, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-203ENST00000452859 ALDH1A3P47895 512 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 TUFMP49411 452 aaKnown RBP20.86■□□□□ 0.93
SNX11-203ENST00000452859 PMS1P54277 932 aaKnown RBP20.86■□□□□ 0.93
SNX11-203ENST00000452859 DUSP4Q13115 394 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 NFE2Q16621 373 aaPredicted RBP20.86■□□□□ 0.93
SNX11-203ENST00000452859 ZNF667Q5HYK9 610 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 CCDC183Q5T5S1 534 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 IQCEQ6IPM2 695 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 TAF4BQ92750 862 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 ZNF512Q96ME7 567 aaPredicted RBP20.86■□□□□ 0.93
SNX11-203ENST00000452859 TMEM209Q96SK2 561 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 RTP3Q9BQQ7 232 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 IMPG2Q9BZV3 1241 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 VRTNQ9H8Y1 702 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.86■□□□□ 0.93
SNX11-203ENST00000452859 NXF1Q9UBU9 619 aaKnown RBP20.86■□□□□ 0.93
SNX11-203ENST00000452859 MTMR11A4FU01 709 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 TRIM49BA6NDI0 452 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 GABRDO14764 452 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 PTPN2P17706 415 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 PAK1Q13153 545 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 RNF135Q8IUD6 432 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 ZC3H3Q8IXZ2 948 aaKnown RBP20.86■□□□□ 0.93
SNX11-203ENST00000452859 CCDC150Q8NCX0 1101 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 FEZF2Q8TBJ5 459 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 SPPL2BQ8TCT7 592 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 CEP63Q96MT8 703 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 XYLT2Q9H1B5 865 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 SNX25Q9H3E2 840 aa20.86■□□□□ 0.93
SNX11-203ENST00000452859 METTL14Q9HCE5 456 aaKnown RBP20.86■□□□□ 0.93
SNX11-203ENST00000452859 C2CD4DB7Z1M9 353 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 TACC1O75410 805 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 TRIM49P0CI25 452 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 TRIM49CP0CI26 452 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 ALADP13716 330 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 FSHRP23945 695 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 GBP2P32456 591 aaPredicted RBP20.85■□□□□ 0.93
SNX11-203ENST00000452859 PIK3CAP42336 1068 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 GCLMP48507 274 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 TWF1Q12792 350 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 LIMS2Q7Z4I7 341 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 ZDHHC14Q8IZN3 488 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 ATAD1Q8NBU5 361 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 ARMCX3Q9UH62 379 aaPredicted RBP20.85■□□□□ 0.93
SNX11-203ENST00000452859 CTNND2Q9UQB3 1225 aa20.85■□□□□ 0.93
SNX11-203ENST00000452859 FGFR1OPO95684 399 aaKnown RBP20.84■□□□□ 0.93
SNX11-203ENST00000452859 WARSP23381 471 aaKnown RBP20.84■□□□□ 0.93
SNX11-203ENST00000452859 EPHB3P54753 998 aa20.84■□□□□ 0.93
SNX11-203ENST00000452859 MCCD1P59942 119 aaPredicted RBP20.84■□□□□ 0.93
SNX11-203ENST00000452859 PABPC1LQ4VXU2 614 aaKnown RBP20.84■□□□□ 0.93
SNX11-203ENST00000452859 INTS6LQ5JSJ4 861 aaKnown RBP20.84■□□□□ 0.93
SNX11-203ENST00000452859 C1orf220Q5T0J3 134 aa20.84■□□□□ 0.93
SNX11-203ENST00000452859 TCERG1LQ5VWI1 586 aa20.84■□□□□ 0.93
SNX11-203ENST00000452859 KRT39Q6A163 491 aa20.84■□□□□ 0.93
SNX11-203ENST00000452859 FILIP1Q7Z7B0 1213 aa20.84■□□□□ 0.93
SNX11-203ENST00000452859 MMRN2Q9H8L6 949 aa20.84■□□□□ 0.93
SNX11-203ENST00000452859 TMEM8AQ9HCN3 771 aa20.84■□□□□ 0.93
SNX11-203ENST00000452859 SLC27A5Q9Y2P5 690 aa20.84■□□□□ 0.93
SNX11-203ENST00000452859 YIPF1Q9Y548 306 aa20.84■□□□□ 0.93
SNX11-203ENST00000452859 PCDHB5Q9Y5E4 795 aa20.84■□□□□ 0.93
SNX11-203ENST00000452859 ZFP37Q9Y6Q3 630 aaPredicted RBP20.84■□□□□ 0.93
SNX11-203ENST00000452859 TSC2P49815 1807 aa20.84■□□□□ 0.93
SNX11-203ENST00000452859 VNN1O95497 513 aa20.83■□□□□ 0.93
SNX11-203ENST00000452859 GNL1P36915 607 aaPredicted RBP20.83■□□□□ 0.93
SNX11-203ENST00000452859 MAPRE1Q15691 268 aaKnown RBP20.83■□□□□ 0.93
SNX11-203ENST00000452859 CYP4A22Q5TCH4 519 aa20.83■□□□□ 0.93
SNX11-203ENST00000452859 TTI2Q6NXR4 508 aa20.83■□□□□ 0.93
SNX11-203ENST00000452859 GET4Q7L5D6 327 aaPredicted RBP20.83■□□□□ 0.93
SNX11-203ENST00000452859 LRRTM3Q86VH5 581 aa20.83■□□□□ 0.93
SNX11-203ENST00000452859 MLKLQ8NB16 471 aa20.83■□□□□ 0.93
SNX11-203ENST00000452859 LEMD2Q8NC56 503 aa20.83■□□□□ 0.93
SNX11-203ENST00000452859 OR6B3Q8NGW1 331 aa20.83■□□□□ 0.93
SNX11-203ENST00000452859 ABI2Q9NYB9 513 aaPredicted RBP20.83■□□□□ 0.93
SNX11-203ENST00000452859 DNMT3BQ9UBC3 853 aaKnown RBP20.83■□□□□ 0.93
SNX11-203ENST00000452859 CDH9Q9ULB4 789 aa20.83■□□□□ 0.93
SNX11-203ENST00000452859 CUL9Q8IWT3 2517 aa20.83■□□□□ 0.92
SNX11-203ENST00000452859 ZNF197O14709 1029 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 HLA-DRAP01903 254 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 ACAT1P24752 427 aaKnown RBP20.82■□□□□ 0.92
SNX11-203ENST00000452859 PPP3CAQ08209 521 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 MGAT5BQ3V5L5 792 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 CCDC40Q4G0X9 1142 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 DCAF17Q5H9S7 520 aaPredicted RBP20.82■□□□□ 0.92
SNX11-203ENST00000452859 FRMD5Q7Z6J6 570 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 ZSCAN30Q86W11 494 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 OSTM1Q86WC4 334 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 KBTBD7Q8WVZ9 684 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 SEPT5Q99719 369 aaPredicted RBP20.82■□□□□ 0.92
SNX11-203ENST00000452859 CORO1BQ9BR76 489 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 AVENQ9NQS1 362 aaPredicted RBP20.82■□□□□ 0.92
SNX11-203ENST00000452859 ASB3Q9Y575 518 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 C2orf16Q68DN1 1984 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 DCXO43602 365 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 VNN2O95498 520 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 GNA14O95837 355 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 RHOP08100 348 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 MSNP26038 577 aaKnown RBP20.82■□□□□ 0.92
SNX11-203ENST00000452859 MXI1P50539 228 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 NTHL1P78549 312 aa20.82■□□□□ 0.92
SNX11-203ENST00000452859 VEPH1Q14D04 833 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms