RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 PFKMP08237 780 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 TBXAS1P24557 533 aaPredicted RBP11.4□□□□□ -0.58
PKP4-206ENST00000452162 CTNNA1P35221 906 aaKnown RBP11.4□□□□□ -0.58
PKP4-206ENST00000452162 AP3M2P53677 418 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 NCOA4Q13772 614 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 PLEKHG4Q58EX7 1191 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 SCARA3Q6AZY7 606 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 RHPN2Q8IUC4 686 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 MCOLN2Q8IZK6 566 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 DBF4BQ8NFT6 615 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 CCDC26Q8TAB7 109 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 ADAMTS10Q9H324 1103 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 ERVK-5Q9HDB9 667 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 CPSF3Q9UKF6 684 aaKnown RBP11.4□□□□□ -0.58
PKP4-206ENST00000452162 TTI1O43156 1089 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 CENPCQ03188 943 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 NAA35Q5VZE5 725 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 AADACL2Q6P093 401 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 TSHZ1Q6ZSZ6 1077 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 MAATS1Q7Z4T9 603 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 FZD8Q9H461 694 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 PTPRHQ9HD43 1115 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 PCDHB4Q9Y5E5 795 aa11.4□□□□□ -0.58
PKP4-206ENST00000452162 CDH23Q9H251 3354 aa11.4□□□□□ -0.59
PKP4-206ENST00000452162 CCDC66A2RUB6 948 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 ASS1P00966 412 aaKnown RBP11.39□□□□□ -0.59
PKP4-206ENST00000452162 MYBL1P10243 752 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 CD52P31358 61 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 HSPA9P38646 679 aaKnown RBP11.39□□□□□ -0.59
PKP4-206ENST00000452162 GUCY2FP51841 1108 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 ZNF132P52740 706 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 CRYBB1P53674 252 aaPredicted RBP11.39□□□□□ -0.59
PKP4-206ENST00000452162 PPP2R5EQ16537 467 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 MPZL3Q6UWV2 235 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 TRIM72Q6ZMU5 477 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 RBBP8NLQ8NC74 664 aaPredicted RBP11.39□□□□□ -0.59
PKP4-206ENST00000452162 HERVK_113Q902F9 699 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 TRIM11Q96F44 468 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 FAM204AQ9H8W3 233 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 PCDHA3Q9Y5H8 950 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 GBF1Q92538 1859 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 A0A087WZ62 844 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 GOLGA6L10A0A0M3HER8 536 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 ACKR2O00590 384 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 SPOPO43791 374 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 HSF2BPO75031 334 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 CSDE1O75534 798 aaKnown RBP11.39□□□□□ -0.59
PKP4-206ENST00000452162 CFHP08603 1231 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 TFDP1Q14186 410 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 RASIP1Q5U651 963 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 CNKSR3Q6P9H4 555 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 TMEM270Q6UE05 265 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 MON1BQ7L1V2 547 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 ADAT2Q7Z6V5 191 aaKnown RBP11.39□□□□□ -0.59
PKP4-206ENST00000452162 DDX42Q86XP3 938 aaKnown RBP eCLIP11.39□□□□□ -0.59
PKP4-206ENST00000452162 IQCKQ8N0W5 287 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 NLRP7Q8WX94 980 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 CPA5Q8WXQ8 436 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 PIK3R5Q8WYR1 880 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 NLRP4Q96MN2 994 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 SCLT1Q96NL6 688 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 ZIM3Q96PE6 472 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 FDXACB1Q9BRP7 624 aaPredicted RBP11.39□□□□□ -0.59
PKP4-206ENST00000452162 TCHPQ9BT92 498 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 MTMR12Q9C0I1 747 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 NEUROG2Q9H2A3 272 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.39□□□□□ -0.592e-7■■■□□ 15.4
PKP4-206ENST00000452162 MYO9BQ13459 2157 aa11.39□□□□□ -0.59
PKP4-206ENST00000452162 ZBBXA8MT70 800 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 CST3P01034 146 aaPredicted RBP11.38□□□□□ -0.59
PKP4-206ENST00000452162 PYGMP11217 842 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 RRM1P23921 792 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 GNA15P30679 374 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 NOMO3P69849 1222 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 MBTD1Q05BQ5 628 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 SURF1Q15526 300 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 ATF7IP2Q5U623 682 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 ZDHHC14Q8IZN3 488 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 SEPT8Q92599 483 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 CYFIP2Q96F07 1278 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 NFKBIZQ9BYH8 718 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 PADI3Q9ULW8 664 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 ANK1P16157 1881 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 TTC3P53804 2025 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 ASAP2O43150 1006 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 B4GALT5O43286 388 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 DAPK3O43293 454 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 OPA1O60313 960 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 PHF2O75151 1096 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 RPS6KA5O75582 802 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 FGFR4P22455 802 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 EIF4BP23588 611 aaKnown RBP11.38□□□□□ -0.59
PKP4-206ENST00000452162 NSFP46459 744 aaKnown RBP11.38□□□□□ -0.59
PKP4-206ENST00000452162 HLTFQ14527 1009 aaKnown RBP eCLIP11.38□□□□□ -0.591e-6■■□□□ 11.4
PKP4-206ENST00000452162 SEL1L2Q5TEA6 688 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 EEF1DP3Q658K8 133 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 FAM228AQ86W67 206 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 PRELID2Q8N945 189 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 IMPG2Q9BZV3 1241 aa11.38□□□□□ -0.59
PKP4-206ENST00000452162 MINDY3Q9H8M7 445 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms