RNA–Protein interactions for RNA: ENST00000450717.7

SMARCA4-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,506 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-205ENST00000450717 RIOX1Q9H6W3 641 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 FAM49BQ9NUQ9 324 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 PCDHGB4Q9UN71 923 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 TCRBV5S4A2TA0A5A2 114 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 SGPL1O95470 568 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 CYBBP04839 570 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 TCF7P36402 384 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 GNL1P36915 607 aaPredicted RBP13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 C1orf131Q8NDD1 294 aaKnown RBP13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 E2F7Q96AV8 911 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 DCUN1D1Q96GG9 259 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 FUT8Q9BYC5 575 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 COG4Q9H9E3 785 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 CASS4Q9NQ75 786 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 GGA3Q9NZ52 723 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 TFR2Q9UP52 801 aa13.8□□□□□ -0.2
SMARCA4-205ENST00000450717 OGTO15294 1046 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 LRRC71Q8N4P6 559 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 SLC7A14Q8TBB6 771 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 UBA3Q8TBC4 463 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 KCNH4Q9UQ05 1017 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 UBE2Q2LH0YL09 131 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 TADA2AO75478 443 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 RPS6KA5O75582 802 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 PKN1Q16512 942 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 LINC00523Q86TU6 105 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 FAM71DQ8N9W8 422 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 GPRC5AQ8NFJ5 357 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 GRAP2O75791 330 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 TAF6P49848 677 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 GMPSP49915 693 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 CACNB2Q08289 660 aaPredicted RBP13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 RFX8Q6ZV50 586 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 PCYOX1LQ8NBM8 494 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 IL17RAQ96F46 866 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 FAM118BQ9BPY3 351 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 DEFB129Q9H1M3 183 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 AFF4Q9UHB7 1163 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 LSM7Q9UK45 103 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 MEGF6O75095 1541 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 SRP72O76094 671 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 CYP2C9P11712 490 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 DAB2IPQ5VWQ8 1189 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 USP33Q8TEY7 942 aa13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 UBQLN1Q9UMX0 589 aaKnown RBP13.79□□□□□ -0.2
SMARCA4-205ENST00000450717 RSPH10B2B2RC85 870 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 NDUFS3O75489 264 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 APOA4P06727 396 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 RSPH10BP0C881 870 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 MAPTP10636 758 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 PTK6Q13882 451 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 CNGA3Q16281 694 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 SMTNL2Q2TAL5 461 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 EPC2Q52LR7 807 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 CYP4A22Q5TCH4 519 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 NT5DC1Q5TFE4 455 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 CCNJLQ8IV13 435 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 TFB1MQ8WVM0 346 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 ZC3H4Q9UPT8 1303 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 CYP11B1P15538 503 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 ITIH4Q14624 930 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 EFL1Q7Z2Z2 1120 aaKnown RBP13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 NSL1Q96IY1 281 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 CGRRF1Q99675 332 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 CCDC90BQ9GZT6 254 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 HACL1Q9UJ83 578 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 CAPN6Q9Y6Q1 641 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 ITGB3P05106 788 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 HIST1H2AGP0C0S8 130 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 HIST1H2ADP20671 130 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 MED21Q13503 144 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 FLOT2Q14254 428 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 PDK2Q15119 407 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 DCAF6Q58WW2 860 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 MDH1BQ5I0G3 518 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 ZNF484Q5JVG2 852 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 PCNX4Q63HM2 1172 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 KDELC2Q7Z4H8 507 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 HIST1H2AHQ96KK5 128 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 HIST1H2AJQ99878 128 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 H2AFJQ9BTM1 129 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 DEPDC5O75140 1603 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 MEI1Q5TIA1 1274 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 FBXW10Q5XX13 1052 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 BTNL9Q6UXG8 535 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 RAB42Q8N4Z0 105 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 ADAM33Q9BZ11 813 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 TMBIM4Q9HC24 238 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 DPP3Q9NY33 737 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 AURKCQ9UQB9 309 aa13.78□□□□□ -0.2
SMARCA4-205ENST00000450717 NPTXRO95502 500 aa13.77□□□□□ -0.2
SMARCA4-205ENST00000450717 MYCP01106 439 aaPredicted RBP13.77□□□□□ -0.2
SMARCA4-205ENST00000450717 VDRP11473 427 aa13.77□□□□□ -0.2
SMARCA4-205ENST00000450717 RMDN2Q96LZ7 410 aa13.77□□□□□ -0.2
SMARCA4-205ENST00000450717 SUPT20HL2P0C7V6 817 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms