RNA–Protein interactions for RNA: ENST00000450385.5

SGCE-208, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-208ENST00000450385 PI15O43692 258 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 MOSPD3O75425 235 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 OR4Q2P0C623 313 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 MYL4P12829 197 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 DDX6P26196 483 aaKnown RBP eCLIP17.23■□□□□ 0.35
SGCE-208ENST00000450385 CDC25CP30307 473 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 NBL1P41271 181 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 AP3M2P53677 418 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 PKP1Q13835 747 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 PSMD6Q15008 389 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 MAPRE1Q15691 268 aaKnown RBP17.23■□□□□ 0.35
SGCE-208ENST00000450385 SNRNP35Q16560 246 aaKnown RBP17.23■□□□□ 0.35
SGCE-208ENST00000450385 FAM78AQ5JUQ0 283 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 LIMS2Q7Z4I7 341 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 TMC8Q8IU68 726 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 PDCL2Q8N4E4 241 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 PJA1Q8NG27 643 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 FUBP3Q96I24 572 aaKnown RBP eCLIP17.23■□□□□ 0.35
SGCE-208ENST00000450385 KXD1Q9BQD3 176 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 DNAJC25Q9H1X3 360 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 SLC27A5Q9Y2P5 690 aa17.23■□□□□ 0.35
SGCE-208ENST00000450385 KRT19P08727 400 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 HAPLN1P10915 354 aaPredicted RBP17.22■□□□□ 0.35
SGCE-208ENST00000450385 FCARP24071 287 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 RPL10AP62906 217 aaKnown RBP17.22■□□□□ 0.35
SGCE-208ENST00000450385 TAF12Q16514 161 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 FOXD4L6Q3SYB3 417 aaPredicted RBP17.22■□□□□ 0.35
SGCE-208ENST00000450385 MGAT5BQ3V5L5 792 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 FOXD4L3Q6VB84 417 aaPredicted RBP17.22■□□□□ 0.35
SGCE-208ENST00000450385 ZNF852Q6ZMS4 543 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 SLC9A9Q8IVB4 645 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 HS6ST3Q8IZP7 471 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 TMEM130Q8N3G9 435 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 ZSWIM2Q8NEG5 633 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 SHKBP1Q8TBC3 707 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 ZSCAN18Q8TBC5 510 aaPredicted RBP17.22■□□□□ 0.35
SGCE-208ENST00000450385 CCDC47Q96A33 483 aaKnown RBP17.22■□□□□ 0.35
SGCE-208ENST00000450385 PAGE5Q96GU1 130 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 HPDLQ96IR7 371 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 GCNAQ96QF7 691 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 IER2Q9BTL4 223 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 MTMR12Q9C0I1 747 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 CRISPLD1Q9H336 500 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 DLGAP2Q9P1A6 1054 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 UXTQ9UBK9 157 aaPredicted RBP17.22■□□□□ 0.35
SGCE-208ENST00000450385 SIX4Q9UIU6 781 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 HPSEQ9Y251 543 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 DMDP11532 3685 aa17.22■□□□□ 0.35
SGCE-208ENST00000450385 NUP210Q8TEM1 1887 aaPredicted RBP17.22■□□□□ 0.35
SGCE-208ENST00000450385 F5P12259 2224 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 A0A1W2PQ27 194 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 A0A1W2PQ64 194 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 A0A1W2PQD8 194 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 H0Y858 1186 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 ACTN4O43707 911 aaKnown RBP17.21■□□□□ 0.35
SGCE-208ENST00000450385 STAU1O95793 577 aaKnown RBP17.21■□□□□ 0.35
SGCE-208ENST00000450385 CSH1P0DML2 217 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 CSH2P0DML3 217 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 ATICP31939 592 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 AFMP43652 599 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 RPS9P46781 194 aaKnown RBP17.21■□□□□ 0.35
SGCE-208ENST00000450385 CYP24A1Q07973 514 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 SNW1Q13573 536 aaKnown RBP17.21■□□□□ 0.35
SGCE-208ENST00000450385 CUL4BQ13620 913 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 BECN1Q14457 450 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 CFAP221Q4G0U5 840 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 LRRTM3Q86VH5 581 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 CBWD2Q8IUF1 395 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 GLIS3Q8NEA6 775 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 HPS3Q969F9 1004 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 TMEM209Q96SK2 561 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 BCO2Q9BYV7 579 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 SLITRK6Q9H5Y7 841 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 BRD9Q9H8M2 597 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 EXOC1Q9NV70 894 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 DDX43Q9NXZ2 648 aaKnown RBP17.21■□□□□ 0.35
SGCE-208ENST00000450385 SERTAD1Q9UHV2 236 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 L1RE1Q9UN81 338 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 SNX9Q9Y5X1 595 aa17.21■□□□□ 0.35
SGCE-208ENST00000450385 CHADO15335 359 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 TNNI1P19237 187 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 SYKP43405 635 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 WNT7BP56706 349 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 FCHO2Q0JRZ9 810 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 BFSP1Q12934 665 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 ANGPT1Q15389 498 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 TEAD2Q15562 447 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 INTS6LQ5JSJ4 861 aaKnown RBP17.2■□□□□ 0.34
SGCE-208ENST00000450385 MAMSTRQ6ZN01 415 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 C4orf50Q6ZRC1 276 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 GAREM2Q75VX8 874 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 TRAPPC11Q7Z392 1133 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 C1orf210Q8IVY1 113 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 ADGRF2Q8IZF7 708 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 SPRYD3Q8NCJ5 442 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 FAM200AQ8TCP9 573 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 NOC3LQ8WTT2 800 aaKnown RBP17.2■□□□□ 0.34
SGCE-208ENST00000450385 CLDN23Q96B33 292 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 ZSWIM3Q96MP5 696 aa17.2■□□□□ 0.34
SGCE-208ENST00000450385 CGRRF1Q99675 332 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms