RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 FSCN2O14926 492 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 LILRB3O75022 631 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 SEC31AO94979 1220 aaKnown RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 FGFR1OPO95684 399 aaKnown RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 CTSAP10619 480 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 FGFR3P22607 806 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 RAP1GAPP47736 663 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 CDH8P55286 799 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 TRPC3Q13507 836 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 BRD3Q15059 726 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 SOWAHAQ2M3V2 549 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 WDR72Q3MJ13 1102 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 WSCD1Q658N2 575 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 GPR153Q6NV75 609 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 DSTYKQ6XUX3 929 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 SCARA5Q6ZMJ2 495 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 LRRC52Q8N7C0 313 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 LMO3Q8TAP4 145 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 LNX1Q8TBB1 728 aaPredicted RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 TATDN2Q93075 761 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 TMEM209Q96SK2 561 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 FAM107BQ9H098 131 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 SDCBP2Q9H190 292 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 L1RE1Q9UN81 338 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 LZTS1Q9Y250 596 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 C2orf71A6NGG8 1288 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 CXCL14O95715 111 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 ASS1P00966 412 aaKnown RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 GYS2P54840 703 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 TUBB4BP68371 445 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 MYL7Q01449 175 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 USP41Q3LFD5 358 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 VARS2Q5ST30 1063 aaKnown RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 SWT1Q5T5J6 900 aaKnown RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 MICALL1Q8N3F8 863 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 LRRN4CLQ8ND94 238 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 FEZF2Q8TBJ5 459 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 ZBTB9Q96C00 473 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 MRPL38Q96DV4 380 aaKnown RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 RTP3Q9BQQ7 232 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 TTPALQ9BTX7 342 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 HERC2P3Q9BVR0 1158 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 CARD6Q9BX69 1037 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 SMYD3Q9H7B4 428 aa10.54□□□□□ -0.72
CCDC171-203ENST00000449575 PUF60Q9UHX1 559 aaKnown RBP10.54□□□□□ -0.72
CCDC171-203ENST00000449575 PTPRDP23468 1912 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-203ENST00000449575 CCDC151A5D8V7 595 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 SASH3O75995 380 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 AFPP02771 609 aaKnown RBP10.53□□□□□ -0.72
CCDC171-203ENST00000449575 CNPP09543 421 aaKnown RBP10.53□□□□□ -0.72
CCDC171-203ENST00000449575 OR4Q2P0C623 313 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 GLUD2P49448 558 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 AP3M2P53677 418 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 DSG1Q02413 1049 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 UBE3AQ05086 875 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 ENPEPQ07075 957 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 MAN2A1Q16706 1144 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 ZNF699Q32M78 642 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 SV2CQ496J9 727 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 USP37Q86T82 979 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 OSTM1Q86WC4 334 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 MRPL43Q8N983 215 aaKnown RBP10.53□□□□□ -0.72
CCDC171-203ENST00000449575 FBXL13Q8NEE6 735 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 KBTBD7Q8WVZ9 684 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 ZNF560Q96MR9 790 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 LPIN3Q9BQK8 851 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 MRPL45Q9BRJ2 306 aaKnown RBP10.53□□□□□ -0.72
CCDC171-203ENST00000449575 FUT8Q9BYC5 575 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 RAB20Q9NX57 234 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 COQ4Q9Y3A0 265 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 SLC9A1P19634 815 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 GTF2H1P32780 548 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 NOP14P78316 857 aaKnown RBP10.53□□□□□ -0.72
CCDC171-203ENST00000449575 CCDC85BQ15834 202 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-203ENST00000449575 VWA3BQ502W6 1294 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 TCEAL5Q5H9L2 206 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 KIAA1841Q6NSI8 718 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 KAT5Q92993 513 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 MMS19Q96T76 1030 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 CLSTN3Q9BQT9 956 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 NDST4Q9H3R1 872 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 GDAP2Q9NXN4 497 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 MAGEC2Q9UBF1 373 aaPredicted RBP10.53□□□□□ -0.72
CCDC171-203ENST00000449575 PCDHB8Q9UN66 801 aa10.53□□□□□ -0.72
CCDC171-203ENST00000449575 C2orf16Q68DN1 1984 aa10.52□□□□□ -0.72
CCDC171-203ENST00000449575 PES1O00541 588 aaKnown RBP10.52□□□□□ -0.73
CCDC171-203ENST00000449575 TEX28O15482 410 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 TRAPPC3O43617 180 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 CPP00450 1065 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 URODP06132 367 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 WEE2P0C1S8 567 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 ACAT1P24752 427 aaKnown RBP10.52□□□□□ -0.73
CCDC171-203ENST00000449575 LMO2P25791 158 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 EEF1GP26641 437 aaKnown RBP10.52□□□□□ -0.73
CCDC171-203ENST00000449575 ASPAP45381 313 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 KLK7P49862 253 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 MRPL58Q14197 206 aaKnown RBP10.52□□□□□ -0.73
CCDC171-203ENST00000449575 PSMD5Q16401 504 aa10.52□□□□□ -0.73
CCDC171-203ENST00000449575 GJB7Q6PEY0 223 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms