RNA–Protein interactions for RNA: ENST00000449389.1

SRRT-205, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 448 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-205ENST00000449389 MLLT6P55198 1093 aaPredicted RBP11.64□□□□□ -0.55
SRRT-205ENST00000449389 FCHO2Q0JRZ9 810 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 SURF1Q15526 300 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 TAF12Q16514 161 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 NFE2Q16621 373 aaPredicted RBP11.64□□□□□ -0.55
SRRT-205ENST00000449389 GPR158Q5T848 1215 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 C1orf228Q6PIY5 440 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 GAREM2Q75VX8 874 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 LRRTM3Q86VH5 581 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 ARID3BQ8IVW6 561 aaPredicted RBP11.64□□□□□ -0.55
SRRT-205ENST00000449389 HSCBQ8IWL3 235 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 TMEM86AQ8N2M4 240 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 SPATA18Q8TC71 538 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 NOC3LQ8WTT2 800 aaKnown RBP11.64□□□□□ -0.55
SRRT-205ENST00000449389 RSPRY1Q96DX4 576 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 MSANTD3Q96H12 275 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 LPIN3Q9BQK8 851 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 IER2Q9BTL4 223 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 TRIM9Q9C026 710 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 PCIF1Q9H4Z3 704 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 PDE11AQ9HCR9 933 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 OBP2AQ9NY56 170 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 ABI2Q9NYB9 513 aaPredicted RBP11.64□□□□□ -0.55
SRRT-205ENST00000449389 ZMYM5Q9UJ78 669 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 L1RE1Q9UN81 338 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 PCDHB5Q9Y5E4 795 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 PIAS3Q9Y6X2 628 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 CACNA1IQ9P0X4 2223 aa11.64□□□□□ -0.55
SRRT-205ENST00000449389 NCANO14594 1321 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 ARNTLO00327 626 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 EIF3DO15371 548 aaKnown RBP eCLIP11.63□□□□□ -0.55
SRRT-205ENST00000449389 HSP90AA1P07900 732 aaKnown RBP11.63□□□□□ -0.55
SRRT-205ENST00000449389 WEE1P30291 646 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 ASIC1P78348 528 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 RBP5P82980 135 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 MYL7Q01449 175 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 BFSP1Q12934 665 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 FZD5Q13467 585 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 STXBP5Q5T5C0 1151 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 CNNM4Q6P4Q7 775 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 SHC4Q6S5L8 630 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 ZNF687Q8N1G0 1237 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 PDCL2Q8N4E4 241 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 CSGALNACT2Q8N6G5 542 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 CSGALNACT1Q8TDX6 532 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 LEO1Q8WVC0 666 aaPredicted RBP11.63□□□□□ -0.55
SRRT-205ENST00000449389 FAM3CQ92520 227 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 DHX58Q96C10 678 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 ANKRD36BP1Q96IX9 119 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 ACBD6Q9BR61 282 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 MKNK1Q9BUB5 465 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 CHRDQ9H2X0 955 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 TASP1Q9H6P5 420 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 MAGEF1Q9HAY2 307 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 IL21Q9HBE4 155 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 KIAA1586Q9HCI6 787 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 GDAP2Q9NXN4 497 aa11.63□□□□□ -0.55
SRRT-205ENST00000449389 NDRG2Q9UN36 371 aaKnown RBP11.63□□□□□ -0.55
SRRT-205ENST00000449389 R3HCC1Q9Y3T6 440 aaKnown RBP11.63□□□□□ -0.55
SRRT-205ENST00000449389 ZNF233A6NK53 670 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 KINO60870 393 aaKnown RBP11.62□□□□□ -0.55
SRRT-205ENST00000449389 F13A1P00488 732 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 KRT19P08727 400 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 ZSCAN22P10073 491 aaPredicted RBP11.62□□□□□ -0.55
SRRT-205ENST00000449389 CYP4F8P98187 520 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 CSTF1Q05048 431 aaKnown RBP11.62□□□□□ -0.55
SRRT-205ENST00000449389 MYO1EQ12965 1108 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 ARHGAP29Q52LW3 1261 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 INTS6LQ5JSJ4 861 aaKnown RBP11.62□□□□□ -0.55
SRRT-205ENST00000449389 FAM26FQ5R3K3 315 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 ATL3Q6DD88 541 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 MAMSTRQ6ZN01 415 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 TOP6BLQ8N6T0 577 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 GLIS3Q8NEA6 775 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 CXorf38Q8TB03 319 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 GIPC2Q8TF65 315 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 MTMR12Q9C0I1 747 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 C8orf33Q9H7E9 229 aaPredicted RBP11.62□□□□□ -0.55
SRRT-205ENST00000449389 ABCB6Q9NP58 842 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 PRMT8Q9NR22 394 aaPredicted RBP11.62□□□□□ -0.55
SRRT-205ENST00000449389 INTS13Q9NVM9 706 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 DDX43Q9NXZ2 648 aaKnown RBP11.62□□□□□ -0.55
SRRT-205ENST00000449389 SIX4Q9UIU6 781 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 PCDHGA2Q9Y5H1 932 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 SNX9Q9Y5X1 595 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 COL4A2P08572 1712 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 FRYLO94915 3013 aa11.62□□□□□ -0.55
SRRT-205ENST00000449389 OTOGLQ3ZCN5 2332 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 UBE4BO95155 1302 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 GPR179Q6PRD1 2367 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 PRPF40AO75400 957 aaKnown RBP11.61□□□□□ -0.55
SRRT-205ENST00000449389 PRAMEF12O95522 483 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 TNNC2P02585 160 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 CSH1P0DML2 217 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 CSH2P0DML3 217 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 CCNE1P24864 410 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 DDX6P26196 483 aaKnown RBP eCLIP11.61□□□□□ -0.55
SRRT-205ENST00000449389 PCSK1P29120 753 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 HOXD13P35453 343 aa11.61□□□□□ -0.55
SRRT-205ENST00000449389 ME1P48163 572 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms