RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 PSMD2Q13200 908 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 DHX8Q14562 1220 aaKnown RBP19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 TMEM196Q5HYL7 178 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 C9orf57Q5W0N0 161 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 PSAPL1Q6NUJ1 521 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 PNMA5Q96PV4 448 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 PYM1Q9BRP8 204 aaKnown RBP19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 ZCWPW1Q9H0M4 648 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 IL21Q9HBE4 155 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 VPS45Q9NRW7 570 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 MAGED2Q9UNF1 606 aaPredicted RBP19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 PCDHGA5Q9Y5G8 931 aa19.5■□□□□ 0.71
CHCHD3-203ENST00000448878 CYB561D2O14569 222 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 U2AF2P26368 475 aaKnown RBP eCLIP19.49■□□□□ 0.716e-8■■■■□ 22.6
CHCHD3-203ENST00000448878 NCKAP1LP55160 1127 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 CREB5Q02930 508 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 TMEM132DQ14C87 1099 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 ELF2Q15723 593 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 MCTP1Q6DN14 999 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 TCEAL6Q6IPX3 200 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 CD302Q8IX05 232 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 CAMKK1Q8N5S9 505 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 MYCT1Q8N699 235 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 TCEAL3Q969E4 200 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 TSPAN18Q96SJ8 248 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 FAM83CQ9BQN1 747 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 LSM14BQ9BX40 385 aaKnown RBP19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 ZHX3Q9H4I2 956 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 HPS4Q9NQG7 708 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 DSEQ9UL01 958 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 TBX20Q9UMR3 447 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 CCL26Q9Y258 94 aa19.49■□□□□ 0.71
CHCHD3-203ENST00000448878 OTOL1A6NHN0 477 aaPredicted RBP19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 K7ENM7 598 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 TRDMT1O14717 391 aaKnown RBP19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 RHOBTB1O94844 696 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 NFICP08651 508 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 ARSAP15289 507 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 PAX3P23760 479 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 GBP1P32455 592 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 GALK1P51570 392 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 SLC12A3P55017 1021 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 SHC2P98077 582 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 PLK5Q496M5 336 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 PLA2G2CQ5R387 149 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 RPLP0P6Q8NHW5 317 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 SPPL2BQ8TCT7 592 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 EXOC4Q96A65 974 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 ZC3H10Q96K80 434 aaKnown RBP19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 EDEM2Q9BV94 578 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 TDP1Q9NUW8 608 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 KCND2Q9NZV8 630 aa19.48■□□□□ 0.71
CHCHD3-203ENST00000448878 VWA3AA6NCI4 1184 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 PIRO00625 290 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 DCLK1O15075 740 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 AKAP3O75969 853 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 FAM13AO94988 1023 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 CYP11A1P05108 521 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 HAPLN1P10915 354 aaPredicted RBP19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 DRD1P21728 446 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 ACOT2P49753 483 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 NOVA1P51513 510 aaKnown RBP19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 TXNDC8Q6A555 127 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 DCP1BQ8IZD4 617 aaKnown RBP19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 STKLD1Q8NE28 680 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 C2orf15Q8WU43 125 aaKnown RBP19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 MRPS31Q92665 395 aaKnown RBP19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 USP13Q92995 863 aaPredicted RBP19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 CHFRQ96EP1 664 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 ZSCAN31Q96LW9 406 aaPredicted RBP19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 P2RY13Q9BPV8 354 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 FBRSL1Q9HCM7 1045 aaKnown RBP19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 ZMYM5Q9UJ78 669 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 INVSQ9Y283 1065 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 SDK1Q7Z5N4 2213 aa19.47■□□□□ 0.71
CHCHD3-203ENST00000448878 ZFHX4Q86UP3 3567 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 C4orf47A7E2U8 309 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 CAVIN2O95810 425 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 KRT18P05783 430 aaKnown RBP19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 TAF6P49848 677 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 DGKEP52429 567 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 NLRP12P59046 1061 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 ARSHQ5FYA8 562 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 HYIQ5T013 277 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 WSCD1Q658N2 575 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 LRRTM3Q86VH5 581 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 GPBP1Q86WP2 473 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 DUSP15Q9H1R2 295 aaPredicted RBP19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 TRPC7Q9HCX4 862 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 DPP3Q9NY33 737 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 CPSF3Q9UKF6 684 aaKnown RBP19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 PCDHB5Q9Y5E4 795 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 ATG2BQ96BY7 2078 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 CHD8Q9HCK8 2581 aa19.46■□□□□ 0.71
CHCHD3-203ENST00000448878 A0A0B4J269 797 aa19.45■□□□□ 0.7
CHCHD3-203ENST00000448878 PRPF40AO75400 957 aaKnown RBP19.45■□□□□ 0.7
CHCHD3-203ENST00000448878 F11P03951 625 aa19.45■□□□□ 0.7
CHCHD3-203ENST00000448878 PROS1P07225 676 aa19.45■□□□□ 0.7
CHCHD3-203ENST00000448878 DDX6P26196 483 aaKnown RBP eCLIP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms