RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 GRID1Q9ULK0 1009 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 PADI4Q9UM07 663 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 POLIQ9UNA4 740 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 NUMBLQ9Y6R0 609 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 TNS1Q9HBL0 1735 aaKnown RBP20.18■□□□□ 0.82
HMGA1-205ENST00000447654 NPHP3-ACAD11A0A0J9YXS1 232 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 TYROBPO43914 113 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 PYGMP11217 842 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 IVDP26440 423 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 SOX5P35711 763 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 HDAC4P56524 1084 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 KRT17Q04695 432 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 ZBTB16Q05516 673 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 DLGAP5Q15398 846 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 MMEL1Q495T6 779 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 ASPRV1Q53RT3 343 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 PCNX4Q63HM2 1172 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 CEP70Q8NHQ1 597 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 PANX3Q96QZ0 392 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 ZNF180Q9UJW8 692 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 PTPN22Q9Y2R2 807 aa20.18■□□□□ 0.82
HMGA1-205ENST00000447654 IGSF9BQ9UPX0 1349 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 DENRO43583 198 aaKnown RBP20.17■□□□□ 0.82
HMGA1-205ENST00000447654 SLC37A4O43826 429 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 ZBED1O96006 694 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 ATP5BP06576 529 aaKnown RBP20.17■□□□□ 0.82
HMGA1-205ENST00000447654 USP41Q3LFD5 358 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 STRIP1Q5VSL9 837 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 THOC7Q6I9Y2 204 aaKnown RBP20.17■□□□□ 0.82
HMGA1-205ENST00000447654 TREML1Q86YW5 311 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 ERI1Q8IV48 349 aaKnown RBP20.17■□□□□ 0.82
HMGA1-205ENST00000447654 SCAIQ8N9R8 606 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 CGREF1Q99674 301 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 PLVAPQ9BX97 442 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 STK33Q9BYT3 514 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 C1orf21Q9H246 121 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 VPS11Q9H270 941 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 Q9H521 79 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 S100A14Q9HCY8 104 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 DDX18Q9NVP1 670 aaKnown RBP20.17■□□□□ 0.82
HMGA1-205ENST00000447654 KIAA1522Q9P206 1035 aaPredicted RBP20.17■□□□□ 0.82
HMGA1-205ENST00000447654 ASIC3Q9UHC3 531 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 USP17L10C9JJH3 530 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 MTA2O94776 668 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 BAG2O95816 211 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 CA4P22748 312 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 TBCCQ15814 346 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 UBE2SQ16763 222 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 CCDC153Q494R4 210 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 MFSD4BQ5TF39 518 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 SIAH1Q8IUQ4 282 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 GLIS3Q8NEA6 775 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 TTC1Q99614 292 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 ANAPC5Q9UJX4 755 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 PLA2G4CQ9UP65 541 aa20.17■□□□□ 0.82
HMGA1-205ENST00000447654 C15orf38-AP3S2A0A0A6YYH1 394 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 ESYT2A0FGR8 921 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 BOLA2-SMG1P6H3BVE0 249 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 TDP2O95551 362 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 XRCC5P13010 732 aaKnown RBP20.16■□□□□ 0.82
HMGA1-205ENST00000447654 ITGA8P53708 1063 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 CREB5Q02930 508 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 RELAQ04206 551 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 STYK1Q6J9G0 422 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 RNF207Q6ZRF8 634 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 RAPH1Q70E73 1250 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 ARPINQ7Z6K5 226 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 ZNF696Q9H7X3 374 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 FAF1Q9UNN5 650 aaPredicted RBP20.16■□□□□ 0.82
HMGA1-205ENST00000447654 PCDHA2Q9Y5H9 948 aa20.16■□□□□ 0.82
HMGA1-205ENST00000447654 MAGEB3O15480 346 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 RPA3P35244 121 aaPredicted RBP20.15■□□□□ 0.82
HMGA1-205ENST00000447654 JAG1P78504 1218 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 MSLNQ13421 630 aaPredicted RBP20.15■□□□□ 0.82
HMGA1-205ENST00000447654 KIF22Q14807 665 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 NADK2Q4G0N4 442 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 NOP9Q86U38 636 aaKnown RBP20.15■□□□□ 0.82
HMGA1-205ENST00000447654 GLYCTKQ8IVS8 523 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 ULK2Q8IYT8 1036 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 AHI1Q8N157 1196 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 ZFP28Q8NHY6 868 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 JADE3Q92613 823 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 CD101Q93033 1021 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 ARHGEF26Q96DR7 871 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 MTMR9Q96QG7 549 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 PPM1HQ9ULR3 514 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 AK5Q9Y6K8 562 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 MYO3BQ8WXR4 1341 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 CASQ2O14958 399 aaPredicted RBP20.15■□□□□ 0.82
HMGA1-205ENST00000447654 HLA-DOAP06340 250 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 ATF2P15336 505 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 SLC1A5Q15758 541 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 KRT79Q5XKE5 535 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 CENPUQ71F23 418 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 RFWD2Q8NHY2 731 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 KRT35Q92764 455 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 MTBPQ96DY7 904 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 KIAA1586Q9HCI6 787 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 COG5Q9UP83 839 aa20.15■□□□□ 0.82
HMGA1-205ENST00000447654 SEC23IPQ9Y6Y8 1000 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms