RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 DHX9Q08211 1270 aaKnown RBP20.65■□□□□ 0.9
FAM3A-215ENST00000447601 UAP1Q16222 522 aaPredicted RBP20.65■□□□□ 0.9
FAM3A-215ENST00000447601 CCL14Q16627 93 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 PTPN20Q4JDL3 420 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 TTMPQ5BVD1 217 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 RUFY4Q6ZNE9 571 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 IFNL1Q8IU54 200 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 NIPA2Q8N8Q9 360 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 GRK7Q8WTQ7 553 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 C1orf54Q8WWF1 131 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 LENG1Q96BZ8 264 aaPredicted RBP20.65■□□□□ 0.9
FAM3A-215ENST00000447601 RBM41Q96IZ5 413 aaKnown RBP20.65■□□□□ 0.9
FAM3A-215ENST00000447601 SNX27Q96L92 541 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 TWNKQ96RR1 684 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 KATNAL1Q9BW62 490 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 GRHL1Q9NZI5 618 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 BARX2Q9UMQ3 279 aaPredicted RBP20.65■□□□□ 0.9
FAM3A-215ENST00000447601 PTPN22Q9Y2R2 807 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 ANK1P16157 1881 aa20.65■□□□□ 0.9
FAM3A-215ENST00000447601 GOLGA6L10A6NI86 522 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 O00370 1275 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 HMGCRP04035 888 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 RALAP11233 206 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 RPL21P46778 160 aaKnown RBP20.64■□□□□ 0.9
FAM3A-215ENST00000447601 PLTPP55058 493 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 GSCP56915 257 aaPredicted RBP20.64■□□□□ 0.9
FAM3A-215ENST00000447601 ADAM17P78536 824 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 ZNF252P-AS1Q0IIN9 211 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 KLF1Q13351 362 aaPredicted RBP20.64■□□□□ 0.9
FAM3A-215ENST00000447601 KCTD19Q17RG1 926 aaPredicted RBP20.64■□□□□ 0.9
FAM3A-215ENST00000447601 CYP4A22Q5TCH4 519 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 ZDHHC24Q6UX98 284 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 TMEM130Q8N3G9 435 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 UBLCP1Q8WVY7 318 aaPredicted RBP20.64■□□□□ 0.9
FAM3A-215ENST00000447601 ARL8AQ96BM9 186 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 PKNOX2Q96KN3 472 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 OSBPL8Q9BZF1 889 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 SNTG2Q9NY99 539 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 MTRF1LQ9UGC7 380 aaKnown RBP20.64■□□□□ 0.9
FAM3A-215ENST00000447601 HMGXB4Q9UGU5 601 aa20.64■□□□□ 0.9
FAM3A-215ENST00000447601 WDR3Q9UNX4 943 aaKnown RBP eCLIP20.64■□□□□ 0.9
FAM3A-215ENST00000447601 MYL3P08590 195 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 GJC1P36383 396 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 KCNJ1P48048 391 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 ORC1Q13415 861 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 LLGL1Q15334 1064 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 PPP1R7Q15435 360 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 CNGA2Q16280 664 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 RCOR2Q8IZ40 523 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 DCLK3Q9C098 648 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 SYNCQ9H7C4 482 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 CDHR5Q9HBB8 845 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 ZFYVE28Q9HCC9 887 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 KIAA1257Q9ULG3 409 aa20.64■□□□□ 0.89
FAM3A-215ENST00000447601 SIGLEC16A6NMB1 481 aa20.63■□□□□ 0.89
FAM3A-215ENST00000447601 MICAL2O94851 1124 aa20.63■□□□□ 0.89
FAM3A-215ENST00000447601 SAPCD2Q86UD0 394 aa20.63■□□□□ 0.89
FAM3A-215ENST00000447601 FBXO25Q8TCJ0 367 aa20.63■□□□□ 0.89
FAM3A-215ENST00000447601 HEXIM2Q96MH2 286 aaKnown RBP20.63■□□□□ 0.89
FAM3A-215ENST00000447601 EIF2AQ9BY44 585 aaKnown RBP20.63■□□□□ 0.89
FAM3A-215ENST00000447601 TXLNGYQ9BZA5 131 aa20.63■□□□□ 0.89
FAM3A-215ENST00000447601 TRIM6Q9C030 488 aaPredicted RBP20.63■□□□□ 0.89
FAM3A-215ENST00000447601 CHST7Q9NS84 486 aa20.63■□□□□ 0.89
FAM3A-215ENST00000447601 CYTH4Q9UIA0 394 aa20.63■□□□□ 0.89
FAM3A-215ENST00000447601 F8VP50 259 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 TNPO2O14787 897 aaKnown RBP20.62■□□□□ 0.89
FAM3A-215ENST00000447601 GAS8O95995 478 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 SLC10A3P09131 477 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 KRT3P12035 628 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 CAPN2P17655 700 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 NDST1P52848 882 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 PSMC1P62191 440 aaKnown RBP20.62■□□□□ 0.89
FAM3A-215ENST00000447601 OGDHQ02218 1023 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 NFX1Q12986 1120 aaKnown RBP20.62■□□□□ 0.89
FAM3A-215ENST00000447601 ZNF268Q14587 947 aaPredicted RBP20.62■□□□□ 0.89
FAM3A-215ENST00000447601 CEP85LQ5SZL2 805 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 BEST2Q8NFU1 509 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 FNIP1Q8TF40 1166 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 DNAJB3Q8WWF6 145 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 HERPUD2Q9BSE4 406 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 HEMGNQ9BXL5 484 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 DDX56Q9NY93 547 aaKnown RBP20.62■□□□□ 0.89
FAM3A-215ENST00000447601 GJD2Q9UKL4 321 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 H0YGN5 161 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 GOLGA8SH3BPF8 625 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 M0QYV0 167 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 KRT1P04264 644 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 GNAT1P11488 350 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 COPS2P61201 443 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 KRT17Q04695 432 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 SNX1Q13596 522 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 CCNG2Q16589 344 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 ODF2Q5BJF6 829 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 LRRC52Q8N7C0 313 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 ATG4AQ8WYN0 398 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 CPXM1Q96SM3 734 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 NT5C1AQ9BXI3 368 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 ATP8A1Q9Y2Q0 1164 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 NFS1Q9Y697 457 aa20.62■□□□□ 0.89
FAM3A-215ENST00000447601 C17orf102A2RUQ5 167 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms