RNA–Protein interactions for RNA: ENST00000447510.6

PROM1-201, Transcript of prominin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PROM1, Length 3,977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-201ENST00000447510 SUDS3Q9H7L9 328 aaPredicted RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 RSAD1Q9HA92 442 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 C1orf112Q9NSG2 853 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 AGPAT5Q9NUQ2 364 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 ZFATQ9P243 1243 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 NXF1Q9UBU9 619 aaKnown RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 CNTNAP2Q9UHC6 1331 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 A0A1B0GVG6 124 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 RCCD1A6NED2 376 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 HMGB1P1B2RPK0 211 aaPredicted RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 LPXNO60711 386 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 RECQL4O94761 1208 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 IL18RAPO95256 599 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 GLI1P08151 1106 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 P4HA1P13674 534 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 OR1G1P47890 313 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 CDK7P50613 346 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 PMS1P54277 932 aaKnown RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 NKX3-2P78367 333 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 BTG3Q14201 252 aaPredicted RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 DBN1Q16643 649 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 YTHDF3Q7Z739 585 aaKnown RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 DDX42Q86XP3 938 aaKnown RBP eCLIP6.3□□□□□ -1.4
PROM1-201ENST00000447510 SPATA20Q8TB22 786 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 TMEM40Q8WWA1 233 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 MED15Q96RN5 788 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 EIF2AQ9BY44 585 aaKnown RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 NXF3Q9H4D5 531 aaKnown RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 PDZD7Q9H5P4 517 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 NHEJ1Q9H9Q4 299 aaPredicted RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 PACSIN2Q9UNF0 486 aaPredicted RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 PRG3Q9Y2Y8 225 aaPredicted RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 REXO2Q9Y3B8 237 aaKnown RBP6.3□□□□□ -1.4
PROM1-201ENST00000447510 HYOU1Q9Y4L1 999 aa6.3□□□□□ -1.4
PROM1-201ENST00000447510 MGAMO43451 1857 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 ZNF236Q9UL36 1845 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 A8MUI8 341 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 FTCDO95954 541 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 SETSIPP0DME0 302 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 TNNC1P63316 161 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 BFSP1Q12934 665 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 TCP11X2Q5H9J9 407 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 CDCA2Q69YH5 1023 aaPredicted RBP6.29□□□□□ -1.4
PROM1-201ENST00000447510 MFSD5Q6N075 450 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 TLDC1Q6P9B6 456 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 CNKSR3Q6P9H4 555 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 PSRC1Q6PGN9 363 aaPredicted RBP6.29□□□□□ -1.4
PROM1-201ENST00000447510 DSTYKQ6XUX3 929 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 ERICH1Q86X53 443 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 KLHL23Q8NBE8 558 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 RAPGEF5Q92565 580 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 DHX38Q92620 1227 aaKnown RBP6.29□□□□□ -1.4
PROM1-201ENST00000447510 TAF4BQ92750 862 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.29□□□□□ -1.4
PROM1-201ENST00000447510 UBN1Q9NPG3 1134 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 SLC38A7Q9NVC3 462 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 TRAF3IP3Q9Y228 551 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 IPPQ9Y573 584 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 CAPN6Q9Y6Q1 641 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 DOCK5Q9H7D0 1870 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 TGFB1I1O43294 461 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 EFCAB14O75071 495 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 THP07101 528 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 KRT5P13647 590 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 RFC2P35250 354 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 KCNJ2P63252 427 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 KCNH2Q12809 1159 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 ARHGAP44Q17R89 818 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 EXOC3L4Q17RC7 722 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 CFAP221Q4G0U5 840 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 TTI2Q6NXR4 508 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 FRMD5Q7Z6J6 570 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 PPM1KQ8N3J5 372 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 HELQQ8TDG4 1101 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 FBF1Q8TES7 1133 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 FAM210AQ96ND0 272 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 NFKBIZQ9BYH8 718 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 DPH5Q9H2P9 285 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 PIDD1Q9HB75 910 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 FAM207AQ9NSI2 230 aaPredicted RBP6.29□□□□□ -1.4
PROM1-201ENST00000447510 AGAP1Q9UPQ3 857 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 SLC16A3O15427 465 aaKnown RBP6.29□□□□□ -1.4
PROM1-201ENST00000447510 ZC3H11AO75152 810 aaKnown RBP eCLIP6.29□□□□□ -1.4
PROM1-201ENST00000447510 AKAP3O75969 853 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 PYGBP11216 843 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 MLH1P40692 756 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 TNFSF9P41273 254 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 MAGEA1P43355 309 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 KLK7P49862 253 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 SCNN1GP51170 649 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 ADAM17P78536 824 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 CCDC6Q16204 474 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 BMT2Q1RMZ1 405 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 PAPD7Q5XG87 772 aaKnown RBP6.29□□□□□ -1.4
PROM1-201ENST00000447510 ZNF365Q70YC5 407 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 ZNF570Q96NI8 536 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 MKNK1Q9BUB5 465 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 LSM14BQ9BX40 385 aaKnown RBP6.29□□□□□ -1.4
PROM1-201ENST00000447510 NDST4Q9H3R1 872 aa6.29□□□□□ -1.4
PROM1-201ENST00000447510 MLXIPLQ9NP71 852 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 175.9 ms