RNA–Protein interactions for RNA: ENST00000447283.6

GNE-203, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 5 BASIC

Gene GNE, Length 2,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-203ENST00000447283 TMEM150BA6NC51 233 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 IBSPP21815 317 aaPredicted RBP12.11□□□□□ -0.47
GNE-203ENST00000447283 SCP2P22307 547 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 STX2P32856 288 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 ADCY8P40145 1251 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 FLT3LGP49771 235 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 PRKCEQ02156 737 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 TNFAIP2Q03169 654 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 STRN3Q13033 797 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 MKRN4PQ13434 485 aaPredicted RBP12.11□□□□□ -0.47
GNE-203ENST00000447283 STAT4Q14765 748 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 LLGL1Q15334 1064 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 MTFR1Q15390 333 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 CGB2Q6NT52 195 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 USP37Q86T82 979 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 CYP4X1Q8N118 509 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 RIBC1Q8N443 379 aaPredicted RBP12.11□□□□□ -0.47
GNE-203ENST00000447283 FITM2Q8N6M3 262 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 TMEM161BQ8NDZ6 487 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 GDAP1Q8TB36 358 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 DHX38Q92620 1227 aaKnown RBP12.11□□□□□ -0.47
GNE-203ENST00000447283 SAAL1Q96ER3 474 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 RSRC1Q96IZ7 334 aaKnown RBP12.11□□□□□ -0.47
GNE-203ENST00000447283 CEP170P1Q96L14 293 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 PCYT2Q99447 389 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 CCDC77Q9BR77 488 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 SH2D3AQ9BRG2 576 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 FOXP3Q9BZS1 431 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 GPRC5CQ9NQ84 441 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 NRBP2Q9NSY0 501 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 NKIRAS1Q9NYS0 192 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 NAALADL1Q9UQQ1 740 aa12.11□□□□□ -0.47
GNE-203ENST00000447283 R3HDM2Q9Y2K5 976 aaKnown RBP12.11□□□□□ -0.47
GNE-203ENST00000447283 ZC3H11AO75152 810 aaKnown RBP eCLIP12.1□□□□□ -0.47
GNE-203ENST00000447283 ABHD2P08910 425 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 CCNB1P14635 433 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 SMPD1P17405 629 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 ATP4AP20648 1035 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 CCND1P24385 295 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 CNGA1P29973 690 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 GBP2P32456 591 aaPredicted RBP12.1□□□□□ -0.47
GNE-203ENST00000447283 TRIP13Q15645 432 aaPredicted RBP12.1□□□□□ -0.47
GNE-203ENST00000447283 CCNG2Q16589 344 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 GJC2Q5T442 439 aaPredicted RBP12.1□□□□□ -0.47
GNE-203ENST00000447283 PLA2G4FQ68DD2 849 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 SV2AQ7L0J3 742 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 PLPPR4Q7Z2D5 763 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 ZNF677Q86XU0 584 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 MAB21L3Q8N8X9 362 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 CCDC89Q8N998 374 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 TRIM7Q9C029 511 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 MLXIPLQ9NP71 852 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 NOP53Q9NZM5 478 aaKnown RBP12.1□□□□□ -0.47
GNE-203ENST00000447283 SEPT9Q9UHD8 586 aaPredicted RBP12.1□□□□□ -0.47
GNE-203ENST00000447283 SUFUQ9UMX1 484 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 GABRQQ9UN88 632 aa12.1□□□□□ -0.47
GNE-203ENST00000447283 WDR81Q562E7 1941 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 FOXO6A8MYZ6 492 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 PSTPIP1O43586 416 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 LGR5O75473 907 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 PROSCO94903 275 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 ANP32DO95626 131 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 IGHA2P01877 340 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 OATP04181 439 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 KRT16P08779 473 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 ZNF865P0CJ78 1059 aaPredicted RBP12.09□□□□□ -0.47
GNE-203ENST00000447283 TAC1P20366 129 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 CLNS1AP54105 237 aaKnown RBP12.09□□□□□ -0.47
GNE-203ENST00000447283 CYP24A1Q07973 514 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 MYO1EQ12965 1108 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 CEP128Q6ZU80 1094 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 PPTC7Q8NI37 304 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 NSMCE1Q8WV22 266 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 RMDN2Q96LZ7 410 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 SMARCAD1Q9H4L7 1026 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 CYP26B1Q9NR63 512 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 TOPORSQ9NS56 1045 aaPredicted RBP12.09□□□□□ -0.47
GNE-203ENST00000447283 DNAJC17Q9NVM6 304 aaKnown RBP12.09□□□□□ -0.47
GNE-203ENST00000447283 KLHL14Q9P2G3 628 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 L3MBTL1Q9Y468 752 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 UMODL1Q5DID0 1318 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 RALAP11233 206 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 KRT5P13647 590 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 RRM1P23921 792 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 HOXD10P28358 340 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 NPTX2P47972 431 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 SLC26A2P50443 739 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 PRKCZQ05513 592 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 MGAT5Q09328 741 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 ZKSCAN8Q15776 578 aaPredicted RBP12.09□□□□□ -0.47
GNE-203ENST00000447283 SRRM1Q8IYB3 904 aaKnown RBP12.09□□□□□ -0.47
GNE-203ENST00000447283 AFG1LQ8WV93 481 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 MAML1Q92585 1016 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 NIFKQ9BYG3 293 aaKnown RBP12.09□□□□□ -0.47
GNE-203ENST00000447283 PCDHB2Q9Y5E7 798 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 DOCK5Q9H7D0 1870 aa12.09□□□□□ -0.47
GNE-203ENST00000447283 GPR25O00155 361 aa12.08□□□□□ -0.48
GNE-203ENST00000447283 MAGEB2O15479 319 aa12.08□□□□□ -0.48
GNE-203ENST00000447283 DGAT1O75907 488 aa12.08□□□□□ -0.48
GNE-203ENST00000447283 CYP1A1P04798 512 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms