RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 RAP1GAPP47736 663 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 GCLMP48507 274 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 AP3M2P53677 418 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 PSMC1P62191 440 aaKnown RBP15.9■□□□□ 0.14
HDAC4-204ENST00000446876 TNNC1P63316 161 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 MYL7Q01449 175 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 TSPY1Q01534 308 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 PPP3CAQ08209 521 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 PTPN21Q16825 1174 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 ZNF699Q32M78 642 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 ZACNQ401N2 412 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 INTS6LQ5JSJ4 861 aaKnown RBP15.9■□□□□ 0.14
HDAC4-204ENST00000446876 SCARA5Q6ZMJ2 495 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 INTS8Q75QN2 995 aaKnown RBP15.9■□□□□ 0.14
HDAC4-204ENST00000446876 SV2AQ7L0J3 742 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 PLCD3Q8N3E9 789 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 TCEAL4Q96EI5 215 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 SMYD3Q9H7B4 428 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 C11orf16Q9NQ32 467 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 LMBRD1Q9NUN5 540 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 MAFFQ9ULX9 164 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 CTNND2Q9UQB3 1225 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 PTPRDP23468 1912 aa15.9■□□□□ 0.14
HDAC4-204ENST00000446876 PSMA7O14818 248 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 HLA-DRAP01903 254 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 PDGFRBP09619 1106 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 EPB41P11171 864 aaKnown RBP15.89■□□□□ 0.13
HDAC4-204ENST00000446876 ALADP13716 330 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 CEBPBP17676 345 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 PTPN2P17706 415 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 CCR2P41597 374 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 PIK3CAP42336 1068 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 LHX1P48742 406 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 STIM1Q13586 685 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 MGAT5BQ3V5L5 792 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 SPOPLQ6IQ16 392 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 POTEHQ6S545 545 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 ZC3H3Q8IXZ2 948 aaKnown RBP15.89■□□□□ 0.13
HDAC4-204ENST00000446876 DCP1BQ8IZD4 617 aaKnown RBP15.89■□□□□ 0.13
HDAC4-204ENST00000446876 STKLD1Q8NE28 680 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 NELFBQ8WX92 580 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 RSAD2Q8WXG1 361 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 FGF13Q92913 245 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 SYAP1Q96A49 352 aaPredicted RBP15.89■□□□□ 0.13
HDAC4-204ENST00000446876 PKMYT1Q99640 499 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 LPIN3Q9BQK8 851 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 SYT15Q9BQS2 421 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 ACBD6Q9BR61 282 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 PI4K2AQ9BTU6 479 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 MKNK1Q9BUB5 465 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 GTPBP4Q9BZE4 634 aaKnown RBP15.89■□□□□ 0.13
HDAC4-204ENST00000446876 CLSTN2Q9H4D0 955 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 KIAA1468Q9P260 1216 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 EPS15L1Q9UBC2 864 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 GTF3C4Q9UKN8 822 aa15.89■□□□□ 0.13
HDAC4-204ENST00000446876 MRPS23Q9Y3D9 190 aaKnown RBP15.89■□□□□ 0.13
HDAC4-204ENST00000446876 TECTAO75443 2155 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 MYBPHLA2RUH7 354 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 IKBKBO14920 756 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 LRRN2O75325 713 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 STAU1O95793 577 aaKnown RBP15.88■□□□□ 0.13
HDAC4-204ENST00000446876 MYL4P12829 197 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 LAMP2P13473 410 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 GJA1P17302 382 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 ATF6P18850 670 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 WARSP23381 471 aaKnown RBP15.88■□□□□ 0.13
HDAC4-204ENST00000446876 ATICP31939 592 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 ALDH1A3P47895 512 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 GPR15P49685 360 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 CDH8P55286 799 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 STX17P56962 302 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 LRRC63Q05C16 580 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 PRSS36Q5K4E3 855 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 DPH6Q7L8W6 267 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 NPAS3Q8IXF0 933 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 ELMOD1Q8N336 334 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 OR6B3Q8NGW1 331 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 SPATA18Q8TC71 538 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 GPR152Q8TDT2 470 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 TAS1R2Q8TE23 839 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 DHTKD1Q96HY7 919 aaPredicted RBP15.88■□□□□ 0.13
HDAC4-204ENST00000446876 ZNF512Q96ME7 567 aaPredicted RBP15.88■□□□□ 0.13
HDAC4-204ENST00000446876 DUSP9Q99956 384 aaKnown RBP15.88■□□□□ 0.13
HDAC4-204ENST00000446876 SDCBP2Q9H190 292 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 CRTAC1Q9NQ79 661 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.88■□□□□ 0.131e-6■■□□□ 11.5
HDAC4-204ENST00000446876 CDH7Q9ULB5 785 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 PCDHB5Q9Y5E4 795 aa15.88■□□□□ 0.13
HDAC4-204ENST00000446876 HAPLN1P10915 354 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-204ENST00000446876 PCSK1P29120 753 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 EPHB3P54753 998 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 ZXDAP98168 799 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 FKBP3Q00688 224 aaKnown RBP15.87■□□□□ 0.13
HDAC4-204ENST00000446876 PLD1Q13393 1074 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 DCAF17Q5H9S7 520 aaPredicted RBP15.87■□□□□ 0.13
HDAC4-204ENST00000446876 ZNF667Q5HYK9 610 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 SDHAF4Q5VUM1 108 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 IQCEQ6IPM2 695 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 TTI2Q6NXR4 508 aa15.87■□□□□ 0.13
HDAC4-204ENST00000446876 PDZD4Q76G19 769 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms