RNA–Protein interactions for RNA: ENST00000445346.1

LINC02549-201, Transcript of long intergenic non-protein coding RNA 2549, humanhuman

TSL 1 (best) BASIC

Gene LINC02549, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02549-201ENST00000445346 PCDHGC4Q9Y5F7 938 aa8.71□□□□□ -1.02
LINC02549-201ENST00000445346 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.71□□□□□ -1.02
LINC02549-201ENST00000445346 STK36Q9NRP7 1315 aa8.71□□□□□ -1.02
LINC02549-201ENST00000445346 COL4A3Q01955 1670 aa8.71□□□□□ -1.02
LINC02549-201ENST00000445346 ARHGEF37A1IGU5 675 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 ARHGEF35A5YM69 484 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 H7C4K7 107 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 ZNF263O14978 683 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 PRMT3O60678 531 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 HOXB4P17483 251 aaPredicted RBP8.7□□□□□ -1.02
LINC02549-201ENST00000445346 PSMC3P17980 439 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 TGM1P22735 817 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 NAMPTP43490 491 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 BRCC3P46736 316 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 ROR1Q01973 937 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 SFSWAPQ12872 951 aaKnown RBP8.7□□□□□ -1.02
LINC02549-201ENST00000445346 TRIM29Q14134 588 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 NAB2Q15742 525 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 UPP1Q16831 310 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 ATF7IP2Q5U623 682 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.7□□□□□ -1.02
LINC02549-201ENST00000445346 CATSPER3Q86XQ3 398 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 YAF2Q8IY57 180 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 ERMNQ8TAM6 284 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 FAM200AQ8TCP9 573 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 CSGALNACT1Q8TDX6 532 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 TCEAL4Q96EI5 215 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 ZNF512Q96ME7 567 aaPredicted RBP8.7□□□□□ -1.02
LINC02549-201ENST00000445346 ASB16Q96NS5 453 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 CCDC94Q9BW85 323 aaPredicted RBP8.7□□□□□ -1.02
LINC02549-201ENST00000445346 SLITRK6Q9H5Y7 841 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 GOLGA2P5Q9HBQ8 144 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 TUFT1Q9NNX1 390 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 TOPORSQ9NS56 1045 aaPredicted RBP8.7□□□□□ -1.02
LINC02549-201ENST00000445346 NUB1Q9Y5A7 615 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 PIAS3Q9Y6X2 628 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 EPG5Q9HCE0 2579 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 ACACBO00763 2458 aa8.7□□□□□ -1.02
LINC02549-201ENST00000445346 SMIM28A0A1B0GU29 152 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 WDR27A2RRH5 827 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 K7ERI5 159 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 PODXLO00592 558 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 SLC30A4O14863 429 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 KHNYNO15037 678 aaKnown RBP8.69□□□□□ -1.02
LINC02549-201ENST00000445346 EPB41L2O43491 1005 aaKnown RBP8.69□□□□□ -1.02
LINC02549-201ENST00000445346 PFKFB2O60825 505 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 LRP3O75074 770 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 MICAL2O94851 1124 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 ABLIM3O94929 683 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 FAM157BP0CG42 384 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 SPATA31C1P0DKV0 1188 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 MYL4P12829 197 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 ATF2P15336 505 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 CYP11B2P19099 503 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 FCARP24071 287 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 IGFBP6P24592 240 aaPredicted RBP8.69□□□□□ -1.02
LINC02549-201ENST00000445346 CCNE1P24864 410 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 KPNA1P52294 538 aaPredicted RBP8.69□□□□□ -1.02
LINC02549-201ENST00000445346 EFNA5P52803 228 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 OSTNP61366 133 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 CTXN3Q4LDR2 81 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 PRSS36Q5K4E3 855 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 SAMD5Q5TGI4 173 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 EEF1DP3Q658K8 133 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 IL31Q6EBC2 164 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 SLC8B1Q6J4K2 584 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 VITQ6UXI7 678 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 PRR23CQ6ZRP0 262 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 CEP68Q76N32 757 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 MAP4K3Q8IVH8 894 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 SVOPQ8N4V2 548 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 ZSCAN18Q8TBC5 510 aaPredicted RBP8.69□□□□□ -1.02
LINC02549-201ENST00000445346 DEPDC1BQ8WUY9 529 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 BSNDQ8WZ55 320 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 SMARCD2Q92925 531 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 SUSD3Q96L08 255 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 PPP1R10Q96QC0 940 aaKnown RBP8.69□□□□□ -1.02
LINC02549-201ENST00000445346 KIFC3Q9BVG8 833 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 TRPV5Q9NQA5 729 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 ASAH2Q9NR71 780 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 SEMA4GQ9NTN9 838 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 SLC38A7Q9NVC3 462 aa8.69□□□□□ -1.02
LINC02549-201ENST00000445346 SHISA7A6NL88 538 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 CCDC169A6NNP5 214 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 HEPACAM2A8MVW5 462 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 BTBD18B2RXH4 712 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 CHURC1-FNTBB4DL54 471 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 SYN3O14994 580 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 FOXD2O60548 495 aaPredicted RBP8.68□□□□□ -1.02
LINC02549-201ENST00000445346 MED24O75448 989 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 SEC24AO95486 1093 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 TDGF1P13385 188 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 GJA1P17302 382 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 MARCKSP29966 332 aaPredicted RBP8.68□□□□□ -1.02
LINC02549-201ENST00000445346 MCM7P33993 719 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 CNR2P34972 360 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 VIPR2P41587 438 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 FNTBP49356 437 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 SATB1Q01826 763 aa8.68□□□□□ -1.02
LINC02549-201ENST00000445346 TWF1Q12792 350 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms