RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 FAM124BQ9H5Z6 455 aaPredicted RBP15.07■□□□□ 0
SSBP3-208ENST00000444533 SAMSN1Q9NSI8 373 aaKnown RBP15.07■□□□□ 0
SSBP3-208ENST00000444533 FANCLQ9NW38 375 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 FBXW11Q9UKB1 542 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 POLIQ9UNA4 740 aa15.07■□□□□ 0
SSBP3-208ENST00000444533 VWA8A3KMH1 1905 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 WDR27A2RRH5 827 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 GABRDO14764 452 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 ADAM12O43184 909 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 TBX10O75333 385 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 ABLIM3O94929 683 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 GLP2RO95838 553 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 PDGFRBP09619 1106 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 HNRNPA1P09651 372 aaKnown RBP eCLIP15.06■□□□□ 0
SSBP3-208ENST00000444533 ALDH1A3P47895 512 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 TUFMP49411 452 aaKnown RBP15.06■□□□□ 0
SSBP3-208ENST00000444533 KCNC3Q14003 757 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 CLUL1Q15846 466 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 LEXMQ3ZCV2 418 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 VWA3BQ502W6 1294 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 INTS6LQ5JSJ4 861 aaKnown RBP15.06■□□□□ 0
SSBP3-208ENST00000444533 ATAT1Q5SQI0 421 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 RARS2Q5T160 578 aaKnown RBP15.06■□□□□ 0
SSBP3-208ENST00000444533 SPOPLQ6IQ16 392 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 LILRA6Q6PI73 481 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 UNC93AQ86WB7 457 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 SPATA2LQ8IUW3 424 aaPredicted RBP15.06■□□□□ 0
SSBP3-208ENST00000444533 SLC7A14Q8TBB6 771 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 SPPL2BQ8TCT7 592 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 PGLYRP2Q96PD5 576 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 MED15Q96RN5 788 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 SYT15Q9BQS2 421 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 NDST4Q9H3R1 872 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 SMYD3Q9H7B4 428 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 GCNT4Q9P109 453 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 PCDHB5Q9Y5E4 795 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 ATP8B3O60423 1300 aa15.06■□□□□ 0
SSBP3-208ENST00000444533 CCDC195A0A1B0GUA6 201 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 GTPBP10A4D1E9 387 aaKnown RBP15.05■□□□□ -0
SSBP3-208ENST00000444533 ZMYND10O75800 440 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 WEE2P0C1S8 567 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 OR4Q2P0C623 313 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 ACAT1P24752 427 aaKnown RBP15.05■□□□□ -0
SSBP3-208ENST00000444533 HOXA9P31269 272 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 MTHFRP42898 656 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 SMAD4Q13485 552 aaKnown RBP15.05■□□□□ -0
SSBP3-208ENST00000444533 VEPH1Q14D04 833 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 TAF12Q16514 161 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 EXOC3L4Q17RC7 722 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 FILIP1LQ4L180 1135 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 IQCEQ6IPM2 695 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 RSPO2Q6UXX9 243 aaPredicted RBP15.05■□□□□ -0
SSBP3-208ENST00000444533 RNF19BQ6ZMZ0 732 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 IRF2BP1Q8IU81 584 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 TCEAL8Q8IYN2 117 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 PPM1KQ8N3J5 372 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 EHBP1Q8NDI1 1231 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 VN1R2Q8NFZ6 395 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 OR10T2Q8NGX3 314 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 SEMA4DQ92854 862 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 NECTIN4Q96NY8 510 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 MRPL45Q9BRJ2 306 aaKnown RBP15.05■□□□□ -0
SSBP3-208ENST00000444533 ANP32EQ9BTT0 268 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 ADAM7Q9H2U9 754 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 ABI2Q9NYB9 513 aaPredicted RBP15.05■□□□□ -0
SSBP3-208ENST00000444533 CLEC1BQ9P126 229 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 HSFX1Q9UBD0 423 aa15.05■□□□□ -0
SSBP3-208ENST00000444533 ATG2AQ2TAZ0 1938 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 CD58P19256 250 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 ASPAP45381 313 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 RAP1GAPP47736 663 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 EPHB3P54753 998 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 CDH8P55286 799 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 RBM10P98175 930 aaKnown RBP15.04■□□□□ -0
SSBP3-208ENST00000444533 CYP27A1Q02318 531 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 LRMPQ12912 555 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 MGAT5BQ3V5L5 792 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 CDKAL1Q5VV42 579 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 SCARA3Q6AZY7 606 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 PTCRAQ6ISU1 281 aaPredicted RBP15.04■□□□□ -0
SSBP3-208ENST00000444533 TMC5Q6UXY8 1006 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 ENOSF1Q7L5Y1 443 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 LIMS2Q7Z4I7 341 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 SMRP1Q8NCR6 262 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 CMASQ8NFW8 434 aaPredicted RBP15.04■□□□□ -0
SSBP3-208ENST00000444533 FAM200AQ8TCP9 573 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 KBTBD7Q8WVZ9 684 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 SMG7Q92540 1137 aaKnown RBP15.04■□□□□ -0
SSBP3-208ENST00000444533 SEPT5Q99719 369 aaPredicted RBP15.04■□□□□ -0
SSBP3-208ENST00000444533 APOL5Q9BWW9 433 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 NT5C1AQ9BXI3 368 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 BCO2Q9BYV7 579 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 INTS2Q9H0H0 1204 aaKnown RBP15.04■□□□□ -0
SSBP3-208ENST00000444533 TSPY26PQ9H489 355 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 ABCB6Q9NP58 842 aa15.04■□□□□ -0
SSBP3-208ENST00000444533 MTMR11A4FU01 709 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 PTPN1P18031 435 aaKnown RBP15.03■□□□□ -0
SSBP3-208ENST00000444533 LMO2P25791 158 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 LTBRP36941 435 aa15.03■□□□□ -0
SSBP3-208ENST00000444533 NDST1P52848 882 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms