RNA–Protein interactions for RNA: ENST00000443563.5

HDAC6-211, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-211ENST00000443563 DPCR1Q3MIW9 517 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 SLC39A12Q504Y0 691 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 WDR44Q5JSH3 913 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 FAM114A1Q8IWE2 563 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 ELMOD1Q8N336 334 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 SPPL2BQ8TCT7 592 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 SMG7Q92540 1137 aaKnown RBP11.6□□□□□ -0.55
HDAC6-211ENST00000443563 PHF7Q9BWX1 381 aaPredicted RBP11.6□□□□□ -0.55
HDAC6-211ENST00000443563 ANO10Q9NW15 660 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 RAB20Q9NX57 234 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 CDH9Q9ULB4 789 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 NR2E1Q9Y466 385 aa11.6□□□□□ -0.55
HDAC6-211ENST00000443563 MTMR11A4FU01 709 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 PMM2O15305 246 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 P4HA2O15460 535 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 RFPL2O75678 378 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 OR4Q2P0C623 313 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 PRKCSHP14314 528 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-211ENST00000443563 ALDH1A3P47895 512 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 TUFMP49411 452 aaKnown RBP11.59□□□□□ -0.55
HDAC6-211ENST00000443563 STX1AQ16623 288 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 KLHL40Q2TBA0 621 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 SKOR2Q2VWA4 1001 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-211ENST00000443563 INTS6LQ5JSJ4 861 aaKnown RBP11.59□□□□□ -0.55
HDAC6-211ENST00000443563 SCARA3Q6AZY7 606 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 C4orf50Q6ZRC1 276 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 TRIM59Q8IWR1 403 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 ADHFE1Q8IWW8 467 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 TTC39CQ8N584 583 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 OR6B3Q8NGW1 331 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 OR10T2Q8NGX3 314 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 TAS1R2Q8TE23 839 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 ADAMTS19Q8TE59 1207 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 KBTBD7Q8WVZ9 684 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 SLC35C1Q96A29 364 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 UHRF1Q96T88 793 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-211ENST00000443563 RTP3Q9BQQ7 232 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 THAP9Q9H5L6 903 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 FAM124BQ9H5Z6 455 aaPredicted RBP11.59□□□□□ -0.55
HDAC6-211ENST00000443563 CYP3A43Q9HB55 503 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 COQ4Q9Y3A0 265 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 PCDHB5Q9Y5E4 795 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.59□□□□□ -0.55
HDAC6-211ENST00000443563 INSL5Q9Y5Q6 135 aa11.59□□□□□ -0.55
HDAC6-211ENST00000443563 A8MXQ7 604 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 SEC24AO95486 1093 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 AFPP02771 609 aaKnown RBP11.58□□□□□ -0.56
HDAC6-211ENST00000443563 PTPN2P17706 415 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 FMO5P49326 533 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 EPHB3P54753 998 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 NOP14P78316 857 aaKnown RBP11.58□□□□□ -0.56
HDAC6-211ENST00000443563 DUSP4Q13115 394 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 CBWD6Q4V339 395 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 CBWD3Q5JTY5 395 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 CBWD5Q5RIA9 395 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 IQCEQ6IPM2 695 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 CAVIN1Q6NZI2 390 aaKnown RBP11.58□□□□□ -0.56
HDAC6-211ENST00000443563 OSTM1Q86WC4 334 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 ZNF707Q96C28 371 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-211ENST00000443563 ACSF2Q96CM8 615 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-211ENST00000443563 FUBP3Q96I24 572 aaKnown RBP eCLIP11.58□□□□□ -0.56
HDAC6-211ENST00000443563 TNIP3Q96KP6 325 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 CNOT6LQ96LI5 555 aaKnown RBP11.58□□□□□ -0.56
HDAC6-211ENST00000443563 ZNF512Q96ME7 567 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-211ENST00000443563 PGLYRP2Q96PD5 576 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 TMEM209Q96SK2 561 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 SYT15Q9BQS2 421 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 NIF3L1Q9GZT8 377 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 POMKQ9H5K3 350 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 WDR6Q9NNW5 1121 aaKnown RBP11.58□□□□□ -0.56
HDAC6-211ENST00000443563 ABCB6Q9NP58 842 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 TMEM63CQ9P1W3 806 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 MAGEC2Q9UBF1 373 aaPredicted RBP11.58□□□□□ -0.56
HDAC6-211ENST00000443563 POLIQ9UNA4 740 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 USTQ9Y2C2 406 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 ASB3Q9Y575 518 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 CLUHO75153 1309 aa11.58□□□□□ -0.56
HDAC6-211ENST00000443563 BDP1A6H8Y1 2624 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 CCL16O15467 120 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 PDGFRBP09619 1106 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 ACAT1P24752 427 aaKnown RBP11.57□□□□□ -0.56
HDAC6-211ENST00000443563 MTIF2P46199 727 aaKnown RBP11.57□□□□□ -0.56
HDAC6-211ENST00000443563 YWHAEP62258 255 aaKnown RBP11.57□□□□□ -0.56
HDAC6-211ENST00000443563 ZP2Q05996 745 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 TWF1Q12792 350 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 KCNH2Q12809 1159 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 VEPH1Q14D04 833 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 MGAT5BQ3V5L5 792 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 SCARA5Q6ZMJ2 495 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 OTOP3Q7RTS5 596 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 ITIH5Q86UX2 942 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 UNC93AQ86WB7 457 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 CREBRFQ8IUR6 639 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 SPATA2LQ8IUW3 424 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-211ENST00000443563 PLCD3Q8N3E9 789 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 LEMD2Q8NC56 503 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 ENOX1Q8TC92 643 aaKnown RBP11.57□□□□□ -0.56
HDAC6-211ENST00000443563 MRPL45Q9BRJ2 306 aaKnown RBP11.57□□□□□ -0.56
HDAC6-211ENST00000443563 BCO2Q9BYV7 579 aa11.57□□□□□ -0.56
HDAC6-211ENST00000443563 NAT10Q9H0A0 1025 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms