RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 TUFMP49411 452 aaKnown RBP15.63■□□□□ 0.09
HMGN1-208ENST00000443046 GUCY2FP51841 1108 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 CMTM8Q8IZV2 173 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 ABCA7Q8IZY2 2146 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 TSPAN18Q96SJ8 248 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 MMTAG2Q9BU76 263 aaKnown RBP15.63■□□□□ 0.09
HMGN1-208ENST00000443046 KCNG1Q9UIX4 513 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 TBX20Q9UMR3 447 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 CCL26Q9Y258 94 aa15.63■□□□□ 0.09
HMGN1-208ENST00000443046 ZNF638Q14966 1978 aaKnown RBP15.62■□□□□ 0.09
HMGN1-208ENST00000443046 KIAA1549LQ6ZVL6 1849 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 SCN1AP35498 2009 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 BCLAF3A2AJT9 711 aaKnown RBP15.62■□□□□ 0.09
HMGN1-208ENST00000443046 SOBPA7XYQ1 873 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 GIPC1O14908 333 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 EGFP01133 1207 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 DRD1P21728 446 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 COL9A2Q14055 689 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-208ENST00000443046 IL17AQ16552 155 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 SPATA1Q5VX52 437 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 ARMCX5Q6P1M9 558 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 RIN3Q8TB24 985 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 EZH1Q92800 747 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-208ENST00000443046 USP13Q92995 863 aaPredicted RBP15.62■□□□□ 0.09
HMGN1-208ENST00000443046 SENP8Q96LD8 212 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 EDEM2Q9BV94 578 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 ZCWPW1Q9H0M4 648 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 EBF3Q9H4W6 596 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 OBSL1O75147 1896 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 MYO16Q9Y6X6 1858 aa15.62■□□□□ 0.09
HMGN1-208ENST00000443046 C4orf47A7E2U8 309 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 PP2D1A8MPX8 630 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 PIRO00625 290 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 XPOTO43592 962 aaKnown RBP15.61■□□□□ 0.09
HMGN1-208ENST00000443046 RHOBTB1O94844 696 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 F11P03951 625 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 ODC1P11926 461 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 HOXB3P14651 431 aaPredicted RBP15.61■□□□□ 0.09
HMGN1-208ENST00000443046 TOB1P50616 345 aaPredicted RBP15.61■□□□□ 0.09
HMGN1-208ENST00000443046 NOVA1P51513 510 aaKnown RBP15.61■□□□□ 0.09
HMGN1-208ENST00000443046 GALK1P51570 392 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 SMTNP53814 917 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 PPP2R3AQ06190 1150 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 NBR1Q14596 966 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 ENOX2Q16206 610 aaKnown RBP15.61■□□□□ 0.09
HMGN1-208ENST00000443046 SLC39A12Q504Y0 691 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 TRIM68Q6AZZ1 485 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 SYT13Q7L8C5 426 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 FBXO18Q8NFZ0 1043 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 C8orf76Q96K31 380 aa15.61■□□□□ 0.09
HMGN1-208ENST00000443046 SMG1Q96Q15 3661 aaKnown RBP15.61■□□□□ 0.09
HMGN1-208ENST00000443046 LNP1A1A4G5 178 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 ANO9A1A5B4 782 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 DCLK1O15075 740 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 CAVIN2O95810 425 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 HAPLN1P10915 354 aaPredicted RBP15.6■□□□□ 0.09
HMGN1-208ENST00000443046 HMGA1P17096 107 aaKnown RBP15.6■□□□□ 0.09
HMGN1-208ENST00000443046 DDX6P26196 483 aaKnown RBP eCLIP15.6■□□□□ 0.091e-5■■■□□ 17.8
HMGN1-208ENST00000443046 CDC25AP30304 524 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 NCKAP1LP55160 1127 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 AMPD2Q01433 879 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 SMARCB1Q12824 385 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 ZNF268Q14587 947 aaPredicted RBP15.6■□□□□ 0.09
HMGN1-208ENST00000443046 VEPH1Q14D04 833 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 KYAT1Q16773 422 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 MGAT5BQ3V5L5 792 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 FBXO43Q4G163 708 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 HYIQ5T013 277 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 KRT79Q5XKE5 535 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 LRRTM3Q86VH5 581 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 C2orf15Q8WU43 125 aaKnown RBP15.6■□□□□ 0.09
HMGN1-208ENST00000443046 HHIPQ96QV1 700 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 SEPT5Q99719 369 aaPredicted RBP15.6■□□□□ 0.09
HMGN1-208ENST00000443046 RAB34Q9BZG1 259 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 KIF9Q9HAQ2 790 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 TDP1Q9NUW8 608 aa15.6■□□□□ 0.09
HMGN1-208ENST00000443046 ASCC3Q8N3C0 2202 aaKnown RBP15.6■□□□□ 0.09
HMGN1-208ENST00000443046 TMEM8BA6NDV4 472 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 CDX4O14627 284 aaPredicted RBP15.59■□□□□ 0.09
HMGN1-208ENST00000443046 PIGRP01833 764 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 CEACAM1P13688 526 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 ARSAP15289 507 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 CSRP1P21291 193 aaKnown RBP15.59■□□□□ 0.09
HMGN1-208ENST00000443046 GJA4P35212 333 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 AVPR1AP37288 418 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 PRPHP41219 470 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 NLRP12P59046 1061 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 CREB5Q02930 508 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 ZNF252P-AS1Q0IIN9 211 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 KARSQ15046 597 aaKnown RBP15.59■□□□□ 0.09
HMGN1-208ENST00000443046 ELF2Q15723 593 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 SH3PXD2AQ5TCZ1 1133 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 C9orf57Q5W0N0 161 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 NAIF1Q69YI7 327 aaPredicted RBP15.59■□□□□ 0.09
HMGN1-208ENST00000443046 CD302Q8IX05 232 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 MAB21L3Q8N8X9 362 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 SYT2Q8N9I0 419 aaPredicted RBP15.59■□□□□ 0.09
HMGN1-208ENST00000443046 GIPC2Q8TF65 315 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 GATA6Q92908 595 aa15.59■□□□□ 0.09
HMGN1-208ENST00000443046 GCNAQ96QF7 691 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms