RNA–Protein interactions for RNA: ENST00000441310.6

PMS1-213, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PMS1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-213ENST00000441310 RPL13P26373 211 aaKnown RBP17.68■□□□□ 0.42
PMS1-213ENST00000441310 RPA1P27694 616 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 ADARP55265 1226 aaKnown RBP17.68■□□□□ 0.42
PMS1-213ENST00000441310 RASSF3Q86WH2 238 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 ZC3H3Q8IXZ2 948 aaKnown RBP17.68■□□□□ 0.42
PMS1-213ENST00000441310 ANKFY1Q9P2R3 1169 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 RAPH1Q70E73 1250 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 C10orf71Q711Q0 1435 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 TSPYL2Q9H2G4 693 aaPredicted RBP17.68■□□□□ 0.42
PMS1-213ENST00000441310 VAV3Q9UKW4 847 aa17.68■□□□□ 0.42
PMS1-213ENST00000441310 A0A1W2PPM1 405 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 ZNF862O60290 1169 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 NR3C1P04150 777 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 HOXA7P31268 230 aaPredicted RBP17.67■□□□□ 0.42
PMS1-213ENST00000441310 PLOD1Q02809 727 aaPredicted RBP17.67■□□□□ 0.42
PMS1-213ENST00000441310 KNOP1Q1ED39 458 aaKnown RBP17.67■□□□□ 0.42
PMS1-213ENST00000441310 EAPPQ56P03 285 aaPredicted RBP17.67■□□□□ 0.42
PMS1-213ENST00000441310 MDH1BQ5I0G3 518 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 C11orf63Q6NUN7 778 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.67■□□□□ 0.42
PMS1-213ENST00000441310 STK33Q9BYT3 514 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 CIDEBQ9UHD4 219 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 PPM1HQ9ULR3 514 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 ATAD5Q96QE3 1844 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 IGLV3-22A0A075B6J6 115 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 TXNDC9O14530 226 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 STK10O94804 968 aaKnown RBP17.67■□□□□ 0.42
PMS1-213ENST00000441310 IVDP26440 423 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 SPDYAQ5MJ70 313 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 RIPOR1Q6ZS17 1223 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 RGS9BPQ6ZS82 235 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 CEP70Q8NHQ1 597 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 LZICQ8WZA0 190 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 FAM20AQ96MK3 541 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 CATSPER2Q96P56 530 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 CCPG1Q9ULG6 757 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 ZNF711Q9Y462 761 aa17.67■□□□□ 0.42
PMS1-213ENST00000441310 NFIBO00712 420 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 GAS8O95995 478 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 ARFIP2P53365 341 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 PHF12Q96QT6 1004 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 EURLQ9NYK6 297 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 TBC1D30Q9Y2I9 924 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 RABGAP1Q9Y3P9 1069 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 RBM47A0AV96 593 aaKnown RBP17.66■□□□□ 0.42
PMS1-213ENST00000441310 B2RBV5 119 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 H3BRJ5 948 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 GAS7O60861 476 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 RRM1P23921 792 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 ADRA1DP25100 572 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 HOXD13P35453 343 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 NR1H3Q13133 447 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 MED21Q13503 144 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 SEPT7Q16181 437 aaKnown RBP17.66■□□□□ 0.42
PMS1-213ENST00000441310 KLC3Q6P597 504 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 FBXO27Q8NI29 283 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 TRAIPQ9BWF2 469 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 LRRC19Q9H756 370 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 TYW1Q9NV66 732 aaKnown RBP17.66■□□□□ 0.42
PMS1-213ENST00000441310 ARHGEF38Q9NXL2 777 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 SPDYE16A6NNV3 312 aaPredicted RBP17.66■□□□□ 0.42
PMS1-213ENST00000441310 A8MXQ7 604 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 GCNT3O95395 438 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 DALRD3Q5D0E6 543 aaKnown RBP17.66■□□□□ 0.42
PMS1-213ENST00000441310 NSMFQ6X4W1 530 aa17.66■□□□□ 0.42
PMS1-213ENST00000441310 ZBTB8BQ8NAP8 495 aaPredicted RBP17.66■□□□□ 0.42
PMS1-213ENST00000441310 RAVER2Q9HCJ3 691 aaKnown RBP17.66■□□□□ 0.42
PMS1-213ENST00000441310 PAIP2BQ9ULR5 123 aaKnown RBP17.66■□□□□ 0.42
PMS1-213ENST00000441310 CALUO43852 315 aaPredicted RBP17.65■□□□□ 0.42
PMS1-213ENST00000441310 ASNSP08243 561 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 CRABP2P29373 138 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 CIITAP33076 1130 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 AP2B1P63010 937 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 MOXD1Q6UVY6 613 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 RBM44Q6ZP01 1051 aaKnown RBP17.65■□□□□ 0.42
PMS1-213ENST00000441310 ACAD11Q709F0 780 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 ZNF554Q86TJ5 538 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 SCUBE1Q8IWY4 988 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 ZNF653Q96CK0 615 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 SYT11Q9BT88 431 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 MKNK1Q9BUB5 465 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 WNT8AQ9H1J5 351 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 PRPF4O43172 522 aaKnown RBP eCLIP17.65■□□□□ 0.422e-7■■■□□ 15.6
PMS1-213ENST00000441310 MAP3K10Q02779 954 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 ARHGAP24Q8N264 748 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 AGBL3Q8NEM8 1001 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 IL31RAQ8NI17 732 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 ZNF577Q9BSK1 485 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 TRIM55Q9BYV6 548 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 IQCGQ9H095 443 aaKnown RBP17.65■□□□□ 0.42
PMS1-213ENST00000441310 TRAF3IP3Q9Y228 551 aa17.65■□□□□ 0.42
PMS1-213ENST00000441310 TDRKHQ9Y2W6 561 aaKnown RBP17.65■□□□□ 0.42
PMS1-213ENST00000441310 ZNF646O15015 1829 aaPredicted RBP17.65■□□□□ 0.42
PMS1-213ENST00000441310 PLS3P13797 630 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 GCAP28676 217 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 NMT1P30419 496 aaKnown RBP17.64■□□□□ 0.42
PMS1-213ENST00000441310 MAGEA4P43358 317 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 OTOP1Q7RTM1 612 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 LRRC6Q86X45 466 aa17.64■□□□□ 0.42
PMS1-213ENST00000441310 PANX3Q96QZ0 392 aa17.64■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms