RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ITGB3P05106 788 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 GJC1P36383 396 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 LACTBP83111 547 aaPredicted RBP14.99□□□□□ -0.01
LIMD1-202ENST00000440097 ZFYVE27Q5T4F4 411 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 TRIM72Q6ZMU5 477 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 TAX1BP1Q86VP1 789 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 TMEM130Q8N3G9 435 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 ADPGKQ9BRR6 497 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 DPH5Q9H2P9 285 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 POLIQ9UNA4 740 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 USTQ9Y2C2 406 aa14.99□□□□□ -0.01
LIMD1-202ENST00000440097 CCT8L1PA6NM43 557 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 BHMG1C9JSJ3 638 aaPredicted RBP14.98□□□□□ -0.01
LIMD1-202ENST00000440097 B4GALT4O60513 344 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 IL18RAPO95256 599 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 CYP1A1P04798 512 aaPredicted RBP14.98□□□□□ -0.01
LIMD1-202ENST00000440097 MYBL1P10243 752 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 PYGMP11217 842 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 CYP2B6P20813 491 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 RAP1GAPP47736 663 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 RWDD2BP57060 319 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 NOMO3P69849 1222 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 TCEAL1Q15170 157 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 ZNF667Q5HYK9 610 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 DAB2IPQ5VWQ8 1189 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 JADE1Q6IE81 842 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 TMC3Q7Z5M5 1100 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 CHMP6Q96FZ7 201 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 NFKBIZQ9BYH8 718 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 TRIM6Q9C030 488 aaPredicted RBP14.98□□□□□ -0.01
LIMD1-202ENST00000440097 PDZD7Q9H5P4 517 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 SLITRK6Q9H5Y7 841 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 ERVK-5Q9HDB9 667 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.98□□□□□ -0.01
LIMD1-202ENST00000440097 COL1A2P08123 1366 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 IGF2BP3O00425 579 aaKnown RBP eCLIP14.98□□□□□ -0.01
LIMD1-202ENST00000440097 DR1Q01658 176 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 CLUL1Q15846 466 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 KIAA0319LQ8IZA0 1049 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 CCDC197Q8NCU1 140 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 XPO6Q96QU8 1125 aaKnown RBP14.98□□□□□ -0.01
LIMD1-202ENST00000440097 TTC7AQ9ULT0 858 aaPredicted RBP14.98□□□□□ -0.01
LIMD1-202ENST00000440097 LAMA3Q16787 3333 aa14.98□□□□□ -0.01
LIMD1-202ENST00000440097 MROH7Q68CQ1 1323 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 MCF2P10911 925 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 DHX9Q08211 1270 aaKnown RBP14.97□□□□□ -0.01
LIMD1-202ENST00000440097 ORC1Q13415 861 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 MON1BQ7L1V2 547 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 DPH6Q7L8W6 267 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 STAMBPL1Q96FJ0 436 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 TRIM51Q9BSJ1 452 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 PLVAPQ9BX97 442 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 MRPL47Q9HD33 250 aaKnown RBP14.97□□□□□ -0.01
LIMD1-202ENST00000440097 GJB6O95452 261 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 CDH8P55286 799 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 MAP2K5Q13163 448 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 ERMARDQ5T6L9 678 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 FAM129AQ9BZQ8 928 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 MTUS1Q9ULD2 1270 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 PCDHA3Q9Y5H8 950 aa14.97□□□□□ -0.01
LIMD1-202ENST00000440097 PPP1R12AO14974 1030 aaPredicted RBP14.96□□□□□ -0.01
LIMD1-202ENST00000440097 SKAP2O75563 359 aaPredicted RBP14.96□□□□□ -0.01
LIMD1-202ENST00000440097 PEX5P50542 639 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 POU5F1BQ06416 359 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 AMHR2Q16671 573 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 MARCH8Q5T0T0 291 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 TLK2Q86UE8 772 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 ZDHHC14Q8IZN3 488 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 C1orf127Q8N9H9 656 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 C18orf8Q96DM3 657 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 RSRC1Q96IZ7 334 aaKnown RBP14.96□□□□□ -0.01
LIMD1-202ENST00000440097 AVENQ9NQS1 362 aaPredicted RBP14.96□□□□□ -0.01
LIMD1-202ENST00000440097 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.96□□□□□ -0.01
LIMD1-202ENST00000440097 DOCK3Q8IZD9 2030 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 TLR3O15455 904 aaKnown RBP14.96□□□□□ -0.01
LIMD1-202ENST00000440097 ASPAP45381 313 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 MYO1EQ12965 1108 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 CCL14Q16627 93 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 FAM187BQ17R55 369 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 CCDC63Q8NA47 563 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 TLCD1Q96CP7 247 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 ACAP3Q96P50 834 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 XYLT2Q9H1B5 865 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 CNOT10Q9H9A5 744 aaKnown RBP14.96□□□□□ -0.01
LIMD1-202ENST00000440097 CNTN6Q9UQ52 1028 aa14.96□□□□□ -0.01
LIMD1-202ENST00000440097 TSPAN1O60635 241 aa14.96□□□□□ -0.02
LIMD1-202ENST00000440097 YWHAEP62258 255 aaKnown RBP14.96□□□□□ -0.02
LIMD1-202ENST00000440097 TMEM132DQ14C87 1099 aa14.96□□□□□ -0.02
LIMD1-202ENST00000440097 NAIF1Q69YI7 327 aaPredicted RBP14.96□□□□□ -0.02
LIMD1-202ENST00000440097 CATSPER4Q7RTX7 472 aa14.96□□□□□ -0.02
LIMD1-202ENST00000440097 LINC01465Q8N7H1 131 aa14.96□□□□□ -0.02
LIMD1-202ENST00000440097 TMEM35BQ8NCS4 154 aa14.96□□□□□ -0.02
LIMD1-202ENST00000440097 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.96□□□□□ -0.02
LIMD1-202ENST00000440097 NSMCE1Q8WV22 266 aa14.96□□□□□ -0.02
LIMD1-202ENST00000440097 CD101Q93033 1021 aa14.96□□□□□ -0.02
LIMD1-202ENST00000440097 FLRT1Q9NZU1 646 aa14.96□□□□□ -0.02
LIMD1-202ENST00000440097 PTPN22Q9Y2R2 807 aa14.96□□□□□ -0.02
LIMD1-202ENST00000440097 SCINQ9Y6U3 715 aa14.96□□□□□ -0.02
LIMD1-202ENST00000440097 CAND2O75155 1236 aa14.95□□□□□ -0.02
LIMD1-202ENST00000440097 POLR2BP30876 1174 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms