RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 TRIP10Q15642 601 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 SMUG1Q53HV7 270 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 RABGAP1LQ5R372 815 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 PRPF39Q86UA1 669 aaKnown RBP12.28□□□□□ -0.44
SMPD4-209ENST00000439886 CBWD2Q8IUF1 395 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 SMYD1Q8NB12 490 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-209ENST00000439886 PHF12Q96QT6 1004 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 KIFC3Q9BVG8 833 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 NMUR2Q9GZQ4 415 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 ASB3Q9Y575 518 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 CTDP1Q9Y5B0 961 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-209ENST00000439886 LOC100653049A0A140TA62 436 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 FSCN2O14926 492 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 SORBS3O60504 671 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 KRT34O76011 436 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 PDE5AO76074 875 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 INHBAP08476 426 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 FGFR1P11362 822 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 SIX1Q15475 284 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-209ENST00000439886 MMEL1Q495T6 779 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 TMEM63BQ5T3F8 832 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 FAM102BQ5T8I3 360 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 GRAMD4Q6IC98 578 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 RIPOR1Q6ZS17 1223 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 SCUBE1Q8IWY4 988 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 XXYLT1Q8NBI6 393 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 PRPF31Q8WWY3 499 aaKnown RBP12.28□□□□□ -0.44
SMPD4-209ENST00000439886 CFAP36Q96G28 342 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 TRAPPC9Q96Q05 1148 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 OSBPL10Q9BXB5 764 aa12.28□□□□□ -0.44
SMPD4-209ENST00000439886 ASCC2Q9H1I8 757 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-209ENST00000439886 DMAP1Q9NPF5 467 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-209ENST00000439886 ZNF335Q9H4Z2 1342 aaPredicted RBP12.28□□□□□ -0.44
SMPD4-209ENST00000439886 C2CD2LO14523 706 aa12.27□□□□□ -0.44
SMPD4-209ENST00000439886 OR6B1O95007 311 aa12.27□□□□□ -0.44
SMPD4-209ENST00000439886 HSPA1LP34931 641 aa12.27□□□□□ -0.44
SMPD4-209ENST00000439886 TUFMP49411 452 aaKnown RBP12.27□□□□□ -0.44
SMPD4-209ENST00000439886 GAD2Q05329 585 aa12.27□□□□□ -0.44
SMPD4-209ENST00000439886 AP1B1Q10567 949 aa12.27□□□□□ -0.44
SMPD4-209ENST00000439886 SH2D4BQ5SQS7 431 aa12.27□□□□□ -0.44
SMPD4-209ENST00000439886 NME8Q8N427 588 aa12.27□□□□□ -0.44
SMPD4-209ENST00000439886 ENDOVQ8N8Q3 282 aaKnown RBP12.27□□□□□ -0.44
SMPD4-209ENST00000439886 ZNF395Q9H8N7 513 aaPredicted RBP12.27□□□□□ -0.44
SMPD4-209ENST00000439886 HSPBP1Q9NZL4 362 aa12.27□□□□□ -0.44
SMPD4-209ENST00000439886 SYNPO2Q9UMS6 1093 aa12.27□□□□□ -0.44
SMPD4-209ENST00000439886 ANPEPP15144 967 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 TNNI1P19237 187 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 PHBP35232 272 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 HIRAP54198 1017 aaPredicted RBP12.27□□□□□ -0.45
SMPD4-209ENST00000439886 HIF1AQ16665 826 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 TNFAIP8L3Q5GJ75 292 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 LIN9Q5TKA1 542 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 FOXR2Q6PJQ5 311 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 FBXO27Q8NI29 283 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 RAB3IL1Q8TBN0 382 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 PTPRN2Q92932 1015 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 MECRQ9BV79 373 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 EBF3Q9H4W6 596 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 CD209Q9NNX6 404 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 GPRC5CQ9NQ84 441 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 UVRAGQ9P2Y5 699 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 NENFQ9UMX5 172 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 TMA7Q9Y2S6 64 aaKnown RBP12.27□□□□□ -0.45
SMPD4-209ENST00000439886 PARP4Q9UKK3 1724 aaKnown RBP12.27□□□□□ -0.45
SMPD4-209ENST00000439886 ZMYM2Q9UBW7 1377 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 PIK3CDO00329 1044 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 TLR3O15455 904 aaKnown RBP12.27□□□□□ -0.45
SMPD4-209ENST00000439886 DNAJC6O75061 913 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 TOM1L1O75674 476 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 TAS2R40P59535 323 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 WDR72Q3MJ13 1102 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 HYIQ5T013 277 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 THOC7Q6I9Y2 204 aaKnown RBP12.27□□□□□ -0.45
SMPD4-209ENST00000439886 PADI6Q6TGC4 694 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 PPM1NQ8N819 430 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 RSAD2Q8WXG1 361 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 SLC35B4Q969S0 331 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 ABHD8Q96I13 439 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 KREMEN1Q96MU8 473 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 PAFAH2Q99487 392 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 MPHOSPH6Q99547 160 aaKnown RBP12.27□□□□□ -0.45
SMPD4-209ENST00000439886 ZNF577Q9BSK1 485 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 MRGBPQ9NV56 204 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 NUMBLQ9Y6R0 609 aa12.27□□□□□ -0.45
SMPD4-209ENST00000439886 TNS2Q63HR2 1409 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 LIN52Q52LA3 116 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 SATL1Q86VE3 508 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 TAS1R2Q8TE23 839 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 MORC4Q8TE76 937 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 C7orf43Q8WVR3 580 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 LXNQ9BS40 222 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 PRELID1Q9Y255 219 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 ABLIM1O14639 778 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 SLITRK3O94933 977 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 IVDP26440 423 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 CYP1B1Q16678 543 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 SMTNL2Q2TAL5 461 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 ACAD10Q6JQN1 1059 aa12.26□□□□□ -0.45
SMPD4-209ENST00000439886 RHOT1Q8IXI2 618 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms