RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 PIAS3Q9Y6X2 628 aa19.87■□□□□ 0.77
AC004540.1-201ENST00000439120 PATJQ8NI35 1801 aa19.87■□□□□ 0.77
AC004540.1-201ENST00000439120 CDC25CP30307 473 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 RPS9P46781 194 aaKnown RBP19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 WNT7BP56706 349 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 RBP5P82980 135 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 E2F4Q16254 413 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 STXBP5Q5T5C0 1151 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 GAREM2Q75VX8 874 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 ARID3BQ8IVW6 561 aaPredicted RBP19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 C1orf127Q8N9H9 656 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 GIPC2Q8TF65 315 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 FAM3CQ92520 227 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 CLDN23Q96B33 292 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 BORCS6Q96GS4 357 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 MTMR12Q9C0I1 747 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 PDE11AQ9HCR9 933 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 KBTBD4Q9NVX7 518 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 FBXO4Q9UKT5 387 aa19.86■□□□□ 0.77
AC004540.1-201ENST00000439120 ZSCAN22P10073 491 aaPredicted RBP19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 ATF6P18850 670 aa19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 MYL7Q01449 175 aa19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 CSTF1Q05048 431 aaKnown RBP19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 SURF1Q15526 300 aa19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 NFE2Q16621 373 aaPredicted RBP19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 ZNF528Q3MIS6 628 aa19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 LRRTM3Q86VH5 581 aa19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 GPIHBP1Q8IV16 184 aa19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 TMEM86AQ8N2M4 240 aa19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 PDCL2Q8N4E4 241 aa19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 HPS3Q969F9 1004 aa19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 HINFPQ9BQA5 517 aa19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 MAGEF1Q9HAY2 307 aa19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 DDX43Q9NXZ2 648 aaKnown RBP19.85■□□□□ 0.77
AC004540.1-201ENST00000439120 DMDP11532 3685 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 NUP210Q8TEM1 1887 aaPredicted RBP19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 ZNF233A6NK53 670 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 CHADO15335 359 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 KINO60870 393 aaKnown RBP19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 TNNC2P02585 160 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 HAPLN1P10915 354 aaPredicted RBP19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 ME1P48163 572 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 KPNA1P52294 538 aaPredicted RBP19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 CYP4F8P98187 520 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 MYO1EQ12965 1108 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 SHC4Q6S5L8 630 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 MAML2Q8IZL2 1156 aaPredicted RBP19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 GLIS3Q8NEA6 775 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 FAM13BQ9NYF5 915 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 L1RE1Q9UN81 338 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 SNX9Q9Y5X1 595 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 CFAP54Q96N23 3096 aa19.84■□□□□ 0.77
AC004540.1-201ENST00000439120 NCANO14594 1321 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 COL4A2P08572 1712 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 EIF3DO15371 548 aaKnown RBP eCLIP19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 POLR2DO15514 142 aaKnown RBP19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 PRPF40AO75400 957 aaKnown RBP19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 F13A1P00488 732 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 FCHO2Q0JRZ9 810 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 PPP2R5DQ14738 602 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 FAM26FQ5R3K3 315 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 LMBRD2Q68DH5 695 aaPredicted RBP19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 C1orf228Q6PIY5 440 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 ADGRF2Q8IZF7 708 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 ATRIPQ8WXE1 791 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 RSPRY1Q96DX4 576 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 MSANTD3Q96H12 275 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 ACBD6Q9BR61 282 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 PI4K2AQ9BTU6 479 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 TASP1Q9H6P5 420 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 KIAA1586Q9HCI6 787 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 HSPBP1Q9NZL4 362 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 ZMYM5Q9UJ78 669 aa19.83■□□□□ 0.77
AC004540.1-201ENST00000439120 CCNE1P24864 410 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 LHX1P48742 406 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 DUOXA2Q1HG44 320 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 ARHGAP29Q52LW3 1261 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 CBWD2Q8IUF1 395 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 TOP6BLQ8N6T0 577 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 FAM84AQ96KN4 292 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 C8orf33Q9H7E9 229 aaPredicted RBP19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 INTS13Q9NVM9 706 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 THG1LQ9NWX6 298 aaKnown RBP19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 GDAP2Q9NXN4 497 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 OBP2AQ9NY56 170 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 CFAP45Q9UL16 551 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 MAGED2Q9UNF1 606 aaPredicted RBP19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 CACNA1IQ9P0X4 2223 aa19.82■□□□□ 0.76
AC004540.1-201ENST00000439120 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 SLC38A8A6NNN8 435 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 ACAT1P24752 427 aaKnown RBP19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 PCSK1P29120 753 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 AVPR1AP37288 418 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 RPL10AP62906 217 aaKnown RBP19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 MTAPQ13126 283 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 INTS6LQ5JSJ4 861 aaKnown RBP19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 ATL3Q6DD88 541 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 CNNM4Q6P4Q7 775 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 HS2ST1Q7LGA3 356 aa19.81■□□□□ 0.76
AC004540.1-201ENST00000439120 SPRYD3Q8NCJ5 442 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms