RNA–Protein interactions for RNA: ENST00000438964.6

ACTN1-204, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 3,043 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-204ENST00000438964 ZNFX1Q9P2E3 1918 aaKnown RBP14.08□□□□□ -0.16
ACTN1-204ENST00000438964 ATP8B3O60423 1300 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 LPXNO60711 386 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 AVILO75366 819 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 DSG3P32926 999 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 KCNT1Q5JUK3 1230 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 CDHR3Q6ZTQ4 885 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 MCOLN2Q8IZK6 566 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 HELQQ8TDG4 1101 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 DDX1Q92499 740 aaKnown RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 MPP4Q96JB8 637 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 TRIM56Q9BRZ2 755 aaKnown RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 NDE1Q9NXR1 346 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 SMG5Q9UPR3 1016 aaKnown RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 AK5Q9Y6K8 562 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 ABLIM1O14639 778 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 HOXA7P31268 230 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 SREBF1P36956 1147 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 ATXN3P54252 364 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 CDK16Q00536 496 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 DLG1Q12959 904 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 NCOA4Q13772 614 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 Q4G0T1 1027 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 RASSF3Q86WH2 238 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 ZNF276Q8N554 614 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 SHC3Q92529 594 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 SLCO2A1Q92959 643 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 MKL1Q969V6 931 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 RILPQ96NA2 401 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 WDR83Q9BRX9 315 aaKnown RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 SLC7A8Q9UHI5 535 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 ACTL7BQ9Y614 415 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 IGLV3-22A0A075B6J6 115 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 DNALI1O14645 258 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 ZMPSTE24O75844 475 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 KRT1P04264 644 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 NSFP46459 744 aaKnown RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 SNRNP35Q16560 246 aaKnown RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 CLEC16AQ2KHT3 1053 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 SFT2D3Q587I9 215 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 RALGPS1Q5JS13 557 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 PLA2G4FQ68DD2 849 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 PRPF39Q86UA1 669 aaKnown RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 FBXO36Q8NEA4 188 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 SLC26A7Q8TE54 656 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 FAM20AQ96MK3 541 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 ZNF577Q9BSK1 485 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 POLR3CQ9BUI4 534 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 DMAP1Q9NPF5 467 aaPredicted RBP14.07□□□□□ -0.16
ACTN1-204ENST00000438964 RPS6KL1Q9Y6S9 549 aa14.07□□□□□ -0.16
ACTN1-204ENST00000438964 ATRNL1Q5VV63 1379 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 DENND3A2RUS2 1198 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 F8VP50 259 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 MAP3K6O95382 1288 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 GSTA2P09210 222 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 RARBP10826 455 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 ATP6V1B1P15313 513 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 NOVP48745 357 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 AQP4P55087 323 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 ZNF394Q53GI3 561 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 SCUBE1Q8IWY4 988 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 MBOAT7Q96N66 472 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 MMP19Q99542 508 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 EBF4Q9BQW3 602 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 SAR1AQ9NR31 198 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 IVNS1ABPQ9Y6Y0 642 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-204ENST00000438964 SPDYE16A6NNV3 312 aaPredicted RBP14.06□□□□□ -0.16
ACTN1-204ENST00000438964 PRR5-ARHGAP8B1AHC4 643 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 TLR3O15455 904 aaKnown RBP14.06□□□□□ -0.16
ACTN1-204ENST00000438964 MAGEB3O15480 346 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 PFDN1O60925 122 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 MTA2O94776 668 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 ZWINTO95229 277 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 DLDP09622 509 aaKnown RBP14.06□□□□□ -0.16
ACTN1-204ENST00000438964 GEMIN4P57678 1058 aaKnown RBP14.06□□□□□ -0.16
ACTN1-204ENST00000438964 JAG1P78504 1218 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 ARHGAP8P85298 464 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 CAV1Q03135 178 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 NFX1Q12986 1120 aaKnown RBP14.06□□□□□ -0.16
ACTN1-204ENST00000438964 BMPR2Q13873 1038 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 ZRSR2Q15696 482 aaKnown RBP14.06□□□□□ -0.16
ACTN1-204ENST00000438964 CCNG2Q16589 344 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 HIF1AQ16665 826 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 SLC10A5Q5PT55 438 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 CES4AQ5XG92 561 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 SPATA24Q86W54 205 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 IGDCC3Q8IVU1 814 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 CTAGE3PQ8IX95 158 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 ULK2Q8IYT8 1036 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 CERS5Q8N5B7 392 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 SKA1Q96BD8 255 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 RABGEF1Q9UJ41 708 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 CDK5RAP2Q96SN8 1893 aa14.06□□□□□ -0.16
ACTN1-204ENST00000438964 UMODL1Q5DID0 1318 aa14.05□□□□□ -0.16
ACTN1-204ENST00000438964 LIASO43766 372 aa14.05□□□□□ -0.16
ACTN1-204ENST00000438964 PEX2P28328 305 aa14.05□□□□□ -0.16
ACTN1-204ENST00000438964 FAAP100Q0VG06 881 aa14.05□□□□□ -0.16
ACTN1-204ENST00000438964 MYBPC3Q14896 1274 aa14.05□□□□□ -0.16
ACTN1-204ENST00000438964 HAUS6Q7Z4H7 955 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms