RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 ARL13BQ3SXY8 428 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 PAN2Q504Q3 1202 aaKnown RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 KRTCAP3Q53RY4 240 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 HAUS3Q68CZ6 603 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 ALKBH5Q6P6C2 394 aaKnown RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 APOA5Q6Q788 366 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 NPNTQ6UXI9 565 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 Q6ZSN1 163 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 MRGPRGQ86SM5 289 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 SLC9B2Q86UD5 537 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 COL23A1Q86Y22 540 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 LDLRAD3Q86YD5 345 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 SYTL1Q8IYJ3 562 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 AVL9Q8NBF6 648 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 TMEM145Q8NBT3 493 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 TDRD7Q8NHU6 1098 aaKnown RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 GSDMBQ8TAX9 411 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZNF483Q8TF39 744 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 RFFLQ8WZ73 363 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 LARP4BQ92615 738 aaKnown RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 HTRA1Q92743 480 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 ERCC4Q92889 916 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 C1GALT1C1Q96EU7 318 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 MVB12AQ96EY5 273 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 C2orf40Q9H1Z8 148 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 RMI1Q9H9A7 625 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 JMJD4Q9H9V9 463 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 SLC6A20Q9NP91 592 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 FANCFQ9NPI8 374 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 KCND1Q9NSA2 647 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 ORC3Q9UBD5 711 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 FBXL5Q9UKA1 691 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 PADI4Q9UM07 663 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 MAGED2Q9UNF1 606 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 COG5Q9UP83 839 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 CORO2BQ9UQ03 480 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 TNFRSF18Q9Y5U5 241 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 EPN1Q9Y6I3 576 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 ZFP37Q9Y6Q3 630 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 ABCC9O60706 1549 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 ASXL2Q76L83 1435 aa4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 RSF1Q96T23 1441 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P12-201ENST00000438594 PI4KAP2A4QPH2 592 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 FFAR2O15552 330 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 RRP9O43818 475 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 KIF1CO43896 1103 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 RAMP2O60895 175 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 SOAT2O75908 522 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 FGF18O76093 207 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 GUCA1CO95843 209 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CLTBP09497 229 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 COL6A2P12110 1019 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 TSHRP16473 764 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 FAHP16930 419 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 ACRV1P26436 265 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 HADHAP40939 763 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 HSPA7P48741 367 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CTCFP49711 727 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 AGFG1P52594 562 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CACNB3P54284 484 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 ADKP55263 362 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 IFI35P80217 286 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 UBXN1Q04323 297 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 LRRC74AQ0VAA2 488 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CUL4AQ13619 759 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 ERV3-1Q14264 604 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 PPA1Q15181 289 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 SF3B3Q15393 1217 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CNN3Q15417 329 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 TAF7Q15545 349 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 SMAD1Q15797 465 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 MPEG1Q2M385 716 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 WSCD2Q2TBF2 565 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 ZACNQ401N2 412 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 C5orf22Q49AR2 442 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 ZMAT1Q5H9K5 638 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 FBXO47Q5MNV8 452 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CD276Q5ZPR3 534 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CYP4F22Q6NT55 531 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CRTC1Q6UUV9 634 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 DDX53Q86TM3 631 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 GALNT15Q8N3T1 639 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CAMKK1Q8N5S9 505 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 ATG16L2Q8NAA4 619 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 ZNF540Q8NDQ6 660 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 TTLL11Q8NHH1 800 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 GOT1L1Q8NHS2 421 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 PPP1R14CQ8TAE6 165 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 GABPB2Q8TAK5 448 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 UHMK1Q8TAS1 419 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 BICD2Q8TD16 824 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CACTINQ8WUQ7 758 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 RUFY2Q8WXA3 655 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 LRTOMTQ8WZ04 291 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 HERVK_113Q902F9 699 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 ATP2A3Q93084 1043 aa4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 LTV1Q96GA3 475 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 MAELQ96JY0 434 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CNDP2Q96KP4 475 aaKnown RBP4.02□□□□□ -1.77
HMGB1P12-201ENST00000438594 CCDC140Q96MF4 163 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms