RNA–Protein interactions for RNA: ENST00000437983.2

SMAD9-IT1-201, SMAD9 intronic transcript 1, humanhuman

TSL 3 BASIC

Gene SMAD9-IT1, Length 504 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-IT1-201ENST00000437983 ITPKBP27987 946 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 GJA4P35212 333 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 EPHB3P54753 998 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 FBXO43Q4G163 708 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 MAEAQ7L5Y9 396 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 BEST2Q8NFU1 509 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 ACDQ96AP0 544 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 CNOT6LQ96LI5 555 aaKnown RBP13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 SLC46A2Q9BY10 475 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 GDPD2Q9HCC8 539 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 PRMT7Q9NVM4 692 aaPredicted RBP13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 DDX25Q9UHL0 483 aaKnown RBP13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 NAP1L2Q9ULW6 460 aaPredicted RBP13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 TBX20Q9UMR3 447 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 SLC6A14Q9UN76 642 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 PTPRDP23468 1912 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 KIAA1549LQ6ZVL6 1849 aa13.48□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 PCDH15Q96QU1 1955 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 PIEZO2Q9H5I5 2752 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 TRABD2BA6NFA1 517 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 PRPF3O43395 683 aaKnown RBP13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 LIG1P18858 919 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 WEE1P30291 646 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 P2RY2P41231 377 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 ABCG1P45844 678 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 EXOSC10Q01780 885 aaKnown RBP13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 GFPT1Q06210 699 aaPredicted RBP13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 HNRNPDQ14103 355 aaKnown RBP13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 EPHA7Q15375 998 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 TTC22Q5TAA0 569 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 LYSMD4Q5XG99 296 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 CREB3L3Q68CJ9 461 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 ZNF280DQ6N043 979 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 TOGARAM2Q6ZUX3 1019 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 SCUBE3Q8IX30 993 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 TMEM130Q8N3G9 435 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 DEFB119Q8N690 84 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 TTC9BQ8N6N2 239 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 PRIMPOLQ96LW4 560 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 TASP1Q9H6P5 420 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 CAPN10Q9HC96 672 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 POLMQ9NP87 494 aaPredicted RBP13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 MAFFQ9ULX9 164 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 PCDHB9Q9Y5E1 797 aa13.47□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 USP9XQ93008 2570 aaPredicted RBP13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 SNPHO15079 494 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 CDR1P51861 262 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 SEC13P55735 322 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 FAM187BQ17R55 369 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 ARHGAP15Q53QZ3 475 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 C2orf27AQ580R0 203 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 PEAR1Q5VY43 1037 aaPredicted RBP13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 NCAPH2Q6IBW4 605 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 TPH2Q8IWU9 490 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 CCDC33Q8N5R6 958 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 PSMG2Q969U7 264 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 ZMAT2Q96NC0 199 aaKnown RBP13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 LSG1Q9H089 658 aaKnown RBP13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 PRORYQ9H606 182 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 ZSWIM4Q9H7M6 989 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 KCNMB3Q9NPA1 279 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 DNAAF2Q9NVR5 837 aaKnown RBP13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 NUB1Q9Y5A7 615 aa13.46□□□□□ -0.25
SMAD9-IT1-201ENST00000437983 AP1G2O75843 785 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 DGAT1O75907 488 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 SLITRK3O94933 977 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 SERPINF2P08697 491 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 ALDH1A3P47895 512 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 PLD1Q13393 1074 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 DUOXA1Q1HG43 343 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 CDCA2Q69YH5 1023 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 PCSK4Q6UW60 755 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 TMPRSS7Q7RTY8 843 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 NAXDQ8IW45 347 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 CEP120Q8N960 986 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 ATAD1Q8NBU5 361 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 USP33Q8TEY7 942 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 HAS1Q92839 578 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 USP13Q92995 863 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 CD101Q93033 1021 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 C18orf25Q96B23 403 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 SUSD3Q96L08 255 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 LPIN3Q9BQK8 851 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 CLMPQ9H6B4 373 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 IL21Q9HBE4 155 aa13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 TIMM13Q9Y5L4 95 aaPredicted RBP13.45□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 ARHGAP33O14559 1287 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 GJB3O75712 270 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 GCGRP47871 477 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 NLRP5P59047 1200 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 AMPD2Q01433 879 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 NECTIN1Q15223 517 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 CRY1Q16526 586 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 MAP7D1Q3KQU3 841 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 CENPPQ6IPU0 288 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 ALKAL1Q6UXT8 129 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 CMTM8Q8IZV2 173 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 CCDC148Q8NFR7 591 aa13.44□□□□□ -0.26
SMAD9-IT1-201ENST00000437983 BSNDQ8WZ55 320 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms