RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 ZBTB1Q9Y2K1 713 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 GLRA3O75311 464 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 MAGEA4P43358 317 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 CRKP46108 304 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 PRKAA2P54646 552 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 SCRN3Q0VDG4 424 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 XRCC4Q13426 336 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 CDC73Q6P1J9 531 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 ZBTB49Q6ZSB9 765 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 C1orf54Q8WWF1 131 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 ELMO2Q96JJ3 720 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 WDR12Q9GZL7 423 aaKnown RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 INTS2Q9H0H0 1204 aaKnown RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 CYP2D7A0A087X1C5 515 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 CCDC162PA2VCL2 907 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 CDH6P55285 790 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 RAB2AP61019 212 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 LRRC74BQ6ZQY2 392 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 PEG10Q86TG7 708 aaKnown RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 OR6B3Q8NGW1 331 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 DBR1Q9UK59 544 aaKnown RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 MYH11P35749 1972 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 CLDN3O15551 220 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 HUS1O60921 280 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 CCDC144BQ3MJ40 725 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 L3MBTL3Q96JM7 780 aaPredicted RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 SLITRK2Q9H156 845 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 CD3EAPO15446 510 aaKnown RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 COASYQ13057 564 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 ARID5BQ14865 1188 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 C3orf62Q6ZUJ4 267 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 ULK2Q8IYT8 1036 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 EID3Q8N140 333 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 AGR3Q8TD06 166 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 ZNF184Q99676 751 aaPredicted RBP12□□□□□ -0.49
PTCH1-209ENST00000437951 CHID1Q9BWS9 393 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 EMC3Q9P0I2 261 aa12□□□□□ -0.49
PTCH1-209ENST00000437951 WDR62O43379 1518 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 USP10Q14694 798 aaKnown RBP11.99□□□□□ -0.49
PTCH1-209ENST00000437951 KLHL24Q6TFL4 600 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 PRR23BQ6ZRT6 265 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 FAM20AQ96MK3 541 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 SH3BP4Q9P0V3 963 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 RAD54BQ9Y620 910 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 ZBTB22O15209 634 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 ZNF211Q13398 564 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-209ENST00000437951 EDRF1Q3B7T1 1238 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 MAP3K19Q56UN5 1328 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 AGAP9Q5VTM2 703 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 DSTYKQ6XUX3 929 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 CHMP1BQ7LBR1 199 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 TTC30BQ8N4P2 665 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 SDR42E1Q8WUS8 393 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 CCDC28BQ9BUN5 200 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 SOAT2O75908 522 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 CASP4P49662 377 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 ZNF235Q14590 738 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 CRELD2Q6UXH1 353 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-209ENST00000437951 RDM1Q8NG50 284 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 PABPC3Q9H361 631 aaKnown RBP11.99□□□□□ -0.49
PTCH1-209ENST00000437951 COMMD9Q9P000 198 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 LAMC1P11047 1609 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 USP27XA6NNY8 438 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 TPD52L2O43399 206 aaKnown RBP11.99□□□□□ -0.49
PTCH1-209ENST00000437951 FYNP06241 537 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 GTF2H3Q13889 308 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 KCTD2Q14681 263 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 KRT24Q2M2I5 525 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 THEMIS2Q5TEJ8 643 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 SCARA5Q6ZMJ2 495 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 NUDT18Q6ZVK8 323 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 SCFD2Q8WU76 684 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 ACAD9Q9H845 621 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 MROH7Q68CQ1 1323 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 CSPG5O95196 566 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 CYP21A2P08686 494 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 WEE2P0C1S8 567 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 SYDE2Q5VT97 1194 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 ZNF57Q68EA5 555 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-209ENST00000437951 TMPRSS6Q8IU80 811 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 LENG1Q96BZ8 264 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-209ENST00000437951 SNX13Q9Y5W8 968 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 GYS1P13807 737 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 IL12AP29459 219 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 NFIL3Q16649 462 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 BARGINQ6ZT62 677 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 ZNF554Q86TJ5 538 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 ZNF677Q86XU0 584 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 CAPSLQ8WWF8 208 aa11.99□□□□□ -0.49
PTCH1-209ENST00000437951 EAF2Q96CJ1 260 aaPredicted RBP11.99□□□□□ -0.49
PTCH1-209ENST00000437951 SUPT3HB4E1H0 165 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 SNRPFP62306 86 aaKnown RBP11.98□□□□□ -0.49
PTCH1-209ENST00000437951 NAB2Q15742 525 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 SYTL3Q4VX76 610 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 FAM98BQ52LJ0 330 aaKnown RBP11.98□□□□□ -0.49
PTCH1-209ENST00000437951 SAR1AQ9NR31 198 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 NDUFS3O75489 264 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 KRT34O76011 436 aa11.98□□□□□ -0.49
PTCH1-209ENST00000437951 TCN1P20061 433 aaPredicted RBP11.98□□□□□ -0.49
PTCH1-209ENST00000437951 PRIM2P49643 509 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms