RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 ANO9A1A5B4 782 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 LRRC53A6NM62 1247 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 PIRO00625 290 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 PPEF2O14830 753 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 ASS1P00966 412 aaKnown RBP7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 KRT19P08727 400 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 FGFR1P11362 822 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 TIMP2P16035 220 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 IBSPP21815 317 aaPredicted RBP7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 IGFBP6P24592 240 aaPredicted RBP7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 POLR2BP30876 1174 aaKnown RBP7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 HNRNPH3P31942 346 aaKnown RBP7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 SCNN1GP51170 649 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 JAM2P57087 298 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 RBP5P82980 135 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 RELBQ01201 579 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 TRPC3Q13507 836 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 WDR44Q5JSH3 913 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 CLLU1OSQ5K130 101 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 E4F1Q66K89 784 aaPredicted RBP7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 PDXDC1Q6P996 788 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 CNKSR3Q6P9H4 555 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 WDR59Q6PJI9 974 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 C16orf59Q7L2K0 433 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 CACNA2D4Q7Z3S7 1137 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 TREML1Q86YW5 311 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 TMEM139Q8IV31 216 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 CNGA4Q8IV77 575 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 TMEM199Q8N511 208 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 CCDC150Q8NCX0 1101 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 TTC16Q8NEE8 873 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 BEST2Q8NFU1 509 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 OR8K1Q8NGG5 319 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 KREMEN1Q96MU8 473 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 NT5C1BQ96P26 610 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 PANX2Q96RD6 677 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 STK33Q9BYT3 514 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 GRIP2Q9C0E4 1043 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 KCNF1Q9H3M0 494 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 RSAD1Q9HA92 442 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 UBE2TQ9NPD8 197 aaPredicted RBP7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 UBN1Q9NPG3 1134 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 ABHD10Q9NUJ1 306 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 TMEM161AQ9NX61 479 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 ZDHHC3Q9NYG2 299 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 ITGA11Q9UKX5 1188 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 UBQLN1Q9UMX0 589 aaKnown RBP7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 AGAP1Q9UPQ3 857 aa7.55□□□□□ -1.2
LSM3P3-201ENST00000436601 F8VZ95 297 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 FOXN3O00409 490 aaPredicted RBP7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 POMCP01189 267 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 THP07101 528 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 TPM1P09493 284 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 PNMA6AP0CW24 399 aaPredicted RBP7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 ACRP10323 421 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 CYP3A5P20815 502 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 ACO1P21399 889 aaKnown RBP7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 LRPAP1P30533 357 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 GNA15P30679 374 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 ATICP31939 592 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 EPHB4P54760 987 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 MFAP3P55082 362 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 NOP14P78316 857 aaKnown RBP7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 CCZ1BP86790 482 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 CCZ1P86791 482 aaPredicted RBP7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 GCNT1Q02742 428 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 RAPGEF1Q13905 1077 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 IKBKEQ14164 716 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 DRAP1Q14919 205 aaPredicted RBP7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 MEA1Q16626 185 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 C9orf57Q5W0N0 161 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 IRF2BP2Q7Z5L9 587 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 C7orf61Q8IZ16 206 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 PPM1KQ8N3J5 372 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 ZNF397Q8NF99 534 aaPredicted RBP7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 SHC3Q92529 594 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 TAF4BQ92750 862 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 SYN2Q92777 582 aaPredicted RBP7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 BADQ92934 168 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 HPDLQ96IR7 371 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 ZFAND3Q9H8U3 227 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 GOLGA2P5Q9HBQ8 144 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 AIPL1Q9NZN9 384 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 CACNG4Q9UBN1 327 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 VTI1BQ9UEU0 232 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 MYO6Q9UM54 1294 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 INPP5FQ9Y2H2 1132 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 DAAM1Q9Y4D1 1078 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 PCDHB7Q9Y5E2 793 aa7.54□□□□□ -1.2
LSM3P3-201ENST00000436601 ABHD14A-ACY1A0A1B0GW23 586 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 CCDC85CA6NKD9 419 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 TGFBR3LH3BV60 316 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 XPOTO43592 962 aaKnown RBP7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 B4GALT3O60512 393 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 DDHD2O94830 711 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 PFKMP08237 780 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 SKILP12757 684 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 SYN1P17600 705 aa7.53□□□□□ -1.2
LSM3P3-201ENST00000436601 SOX5P35711 763 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms