RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 TFDP1Q14186 410 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 HSP90AA2PQ14568 343 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 PABPC1LQ4VXU2 614 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 RTP2Q5QGT7 225 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 ARTNQ5T4W7 220 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 CEP135Q66GS9 1140 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 PLA2G4FQ68DD2 849 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 TPRG1Q6ZUI0 275 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 OTUD6AQ7L8S5 288 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 GLYCTKQ8IVS8 523 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 FAM177A1Q8N128 213 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 GSTCDQ8NEC7 633 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 ST13P5Q8NFI4 369 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 TBCKQ8TEA7 893 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 GJA10Q969M2 543 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 TCEANC2Q96MN5 208 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 KXD1Q9BQD3 176 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 CLSTN3Q9BQT9 956 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 RNF26Q9BY78 433 aaPredicted RBP9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 LACRTQ9GZZ8 138 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 CHRDQ9H2X0 955 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 PARD6AQ9NPB6 346 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 NID2Q14112 1375 aa9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 SETXQ7Z333 2677 aaKnown RBP9.31□□□□□ -0.92
NIF3L1-208ENST00000436412 LINC01387J3KSC0 135 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 CCL16O15467 120 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 TDGF1P13385 188 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 CNR2P34972 360 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 CCR3P51677 355 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 NTHL1P78549 312 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 DMWDQ09019 674 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 TUSC3Q13454 348 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 RAB33AQ14088 237 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 EMC2Q15006 297 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 PSMD5Q16401 504 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 CSRP2Q16527 193 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 AXDND1Q5T1B0 1012 aaPredicted RBP9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 TSSK4Q6SA08 328 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 PRSS55Q6UWB4 352 aaPredicted RBP9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 XKR5Q6UX68 686 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 C4orf19Q8IY42 314 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 ITFG1Q8TB96 612 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 LNX1Q8TBB1 728 aaPredicted RBP9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 EDEM1Q92611 657 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 FAM20AQ96MK3 541 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 NFKBIZQ9BYH8 718 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 MUC3BQ9H195 1237 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 ANGPTL2Q9UKU9 493 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 POLIQ9UNA4 740 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 MRPS23Q9Y3D9 190 aaKnown RBP9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 HES2Q9Y543 173 aa9.3□□□□□ -0.92
NIF3L1-208ENST00000436412 A0A1B0GUA9 196 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 INO80B-WBP1J3KQ70 363 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 TDP2O95551 362 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 PDGFAP04085 211 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 IFNAR1P17181 557 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 ARF4P18085 180 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 YWHABP31946 246 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 NLRP5P59047 1200 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 NTRK3Q16288 839 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 FAM171A1Q5VUB5 890 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 GALNT17Q6IS24 598 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 SLC27A1Q6PCB7 646 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 TXNDC11Q6PKC3 985 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 PRR23CQ6ZRP0 262 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 AGGF1Q8N302 714 aaeCLIP9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 FBXL16Q8N461 479 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 SLC7A14Q8TBB6 771 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 ELSPBP1Q96BH3 223 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 SPACA7Q96KW9 195 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 APOL6Q9BWW8 343 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 SLKQ9H2G2 1235 aaPredicted RBP9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 NXF3Q9H4D5 531 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 TRPV5Q9NQA5 729 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 HEBP1Q9NRV9 189 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 SEMA4GQ9NTN9 838 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 KCNK4Q9NYG8 393 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 VPS54Q9P1Q0 977 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 DNMT3BQ9UBC3 853 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 DDX25Q9UHL0 483 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 SALL4Q9UJQ4 1053 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 PCDHA4Q9UN74 947 aa9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 HELZ2Q9BYK8 2649 aaKnown RBP9.29□□□□□ -0.92
NIF3L1-208ENST00000436412 DMXL2Q8TDJ6 3036 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 A6NHS1 94 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 TBX3O15119 743 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 SMNDC1O75940 238 aaKnown RBP eCLIP9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 WISP1O95388 367 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 AKAP5P24588 427 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 MPSTP25325 297 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 LIMK1P53667 647 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 MLLT6P55198 1093 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 SHC2P98077 582 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 MBTD1Q05BQ5 628 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 SIM2Q14190 667 aaPredicted RBP9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 EPHA7Q15375 998 aa9.28□□□□□ -0.92
NIF3L1-208ENST00000436412 ADCK5Q3MIX3 580 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms