RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 ATP8B2P98198 1209 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 TARDBPQ13148 414 aaKnown RBP eCLIP6.99□□□□□ -1.29
HDAC9-213ENST00000433709 MTM1Q13496 603 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 METTL24Q5JXM2 366 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 ODR4Q5SWX8 454 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 NAIF1Q69YI7 327 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-213ENST00000433709 NBPF5PQ86XG9 351 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-213ENST00000433709 TMPRSS6Q8IU80 811 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 TFAP2CQ92754 450 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 HSPBAP1Q96EW2 488 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 PLEKHF1Q96S99 279 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 MYOCQ99972 504 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 MRI1Q9BV20 369 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 CSRNP2Q9H175 543 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 TDP1Q9NUW8 608 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 MOCS1Q9NZB8 636 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 RUVBL1Q9Y265 456 aaKnown RBP6.99□□□□□ -1.29
HDAC9-213ENST00000433709 USP16Q9Y5T5 823 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 UBR2Q8IWV8 1755 aa6.99□□□□□ -1.29
HDAC9-213ENST00000433709 GPR32O75388 356 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 ABLIM3O94929 683 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 CAMTA2O94983 1202 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 C1SP09871 688 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 NPR1P16066 1061 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 RIPK4P57078 832 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 CLRN1P58418 232 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 RAP2BP61225 183 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 DGCR2P98153 550 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 PTH1RQ03431 593 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 DDX10Q13206 875 aaKnown RBP6.98□□□□□ -1.29
HDAC9-213ENST00000433709 PUM1Q14671 1186 aaKnown RBP eCLIP6.98□□□□□ -1.29
HDAC9-213ENST00000433709 HSP90AB3PQ58FF7 597 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 TBC1D9BQ66K14 1250 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 EFCAB12Q6NXP0 572 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 GGNQ86UU5 652 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 SYT12Q8IV01 421 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 OR10H5Q8NGA6 315 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 ZNF622Q969S3 477 aaKnown RBP eCLIP6.98□□□□□ -1.29
HDAC9-213ENST00000433709 RUNDC1Q96C34 613 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 MASTLQ96GX5 879 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 TCF7L1Q9HCS4 588 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 AURKAIP1Q9NWT8 199 aaPredicted RBP6.98□□□□□ -1.29
HDAC9-213ENST00000433709 RNF181Q9P0P0 153 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 CEP72Q9P209 647 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 SLC23A1Q9UHI7 598 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 PCDHB1Q9Y5F3 818 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 RNF123Q5XPI4 1314 aa6.98□□□□□ -1.29
HDAC9-213ENST00000433709 MYH14Q7Z406 1995 aaKnown RBP6.97□□□□□ -1.29
HDAC9-213ENST00000433709 GRXCR1A8MXD5 290 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 PJA2O43164 708 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 HOXB7P09629 217 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 PF4V1P10720 104 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 ATP5JP18859 108 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 CHRNA5P30532 468 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 EIF4A1P60842 406 aaKnown RBP6.97□□□□□ -1.29
HDAC9-213ENST00000433709 FSTL1Q12841 308 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 PIN1Q13526 163 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-213ENST00000433709 ZXDCQ2QGD7 858 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-213ENST00000433709 PARP10Q53GL7 1025 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 RRP12Q5JTH9 1297 aaKnown RBP6.97□□□□□ -1.29
HDAC9-213ENST00000433709 PRR5LQ6MZQ0 368 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 PPP1R42Q7Z4L9 355 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 RSPH3Q86UC2 560 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 CASKIN2Q8WXE0 1202 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 TMX3Q96JJ7 454 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 NDC1Q9BTX1 674 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 RTFDC1Q9BY42 306 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-213ENST00000433709 RHOBTB2Q9BYZ6 727 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 TSPYL4Q9UJ04 414 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 SORCS3Q9UPU3 1222 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 NIP7Q9Y221 180 aaKnown RBP eCLIP6.97□□□□□ -1.29
HDAC9-213ENST00000433709 MYRFQ9Y2G1 1151 aa6.97□□□□□ -1.29
HDAC9-213ENST00000433709 LEFTY2O00292 366 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 FAM20BO75063 409 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 AMHP03971 560 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 S100BP04271 92 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-213ENST00000433709 SRGNP10124 158 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 VEGFAP15692 232 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-213ENST00000433709 ZSCAN20P17040 1043 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-213ENST00000433709 HSPA6P17066 643 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 PDCP20941 246 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 APOBEC3AP31941 199 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-213ENST00000433709 TMPOP42166 694 aaKnown RBP6.96□□□□□ -1.3
HDAC9-213ENST00000433709 FXR1P51114 621 aaKnown RBP eCLIP6.96□□□□□ -1.3
HDAC9-213ENST00000433709 CDC42EP1Q00587 391 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 TOB2Q14106 344 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-213ENST00000433709 DCTN1Q14203 1278 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 ATXN7L2Q5T6C5 722 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-213ENST00000433709 OTUD7BQ6GQQ9 843 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 DRICH1Q6PGQ1 229 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-213ENST00000433709 CATIPQ7Z7H3 387 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 ZFP28Q8NHY6 868 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 PLEKHG4BQ96PX9 1271 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-213ENST00000433709 ZNF180Q9UJW8 692 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 CLCA2Q9UQC9 943 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 ANKRD6Q9Y2G4 727 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 MAP3K15Q6ZN16 1313 aa6.96□□□□□ -1.3
HDAC9-213ENST00000433709 IBTKQ9P2D0 1353 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-213ENST00000433709 SIPA1L3O60292 1781 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms