RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 DPP7Q9UHL4 492 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 SIX4Q9UIU6 781 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 TRAF3IP3Q9Y228 551 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 FRMD4BQ9Y2L6 1034 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 SNX9Q9Y5X1 595 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 BACE2Q9Y5Z0 518 aa6.21□□□□□ -1.42
HMGB3P24-201ENST00000433260 DOCK6Q96HP0 2047 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 LRRIQ3A6PVS8 624 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 RNF223E7ERA6 249 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 PRRG1O14668 218 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 TBC1D4O60343 1298 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 HUS1O60921 280 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 AKAP3O75969 853 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 ABLIM3O94929 683 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 OAZ2O95190 189 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 PDGFRBP09619 1106 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 KRT13P13646 458 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 TYMPP19971 482 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 BMP6P22004 513 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 RPL13P26373 211 aaKnown RBP6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 GBP2P32456 591 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 PSMC2P35998 433 aaKnown RBP6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 MTHFRP42898 656 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 VAMP7P51809 220 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 PMS1P54277 932 aaKnown RBP6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 STX17P56962 302 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 MYL6P60660 151 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 PTK2Q05397 1052 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 MYO1EQ12965 1108 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 WDR72Q3MJ13 1102 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 SLC39A12Q504Y0 691 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 LIN9Q5TKA1 542 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 SLC8B1Q6J4K2 584 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 KLHL10Q6JEL2 608 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 ELMSAN1Q6PJG2 1045 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 GRASPQ7Z6J2 395 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 LRRTM3Q86VH5 581 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 ADHFE1Q8IWW8 467 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 C12orf56Q8IXR9 622 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 ELOA2Q8IYF1 753 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 GPR65Q8IYL9 337 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 ADSSL1Q8N142 457 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 CXorf38Q8TB03 319 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 EPS8L1Q8TE68 723 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 PARD3BQ8TEW8 1205 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 HDAC7Q8WUI4 952 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 SUSD6Q92537 303 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZNF560Q96MR9 790 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 TSG101Q99816 390 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 LPIN3Q9BQK8 851 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 PRKD2Q9BZL6 878 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 GZF1Q9H116 711 aaPredicted RBP6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 PLEKHA4Q9H4M7 779 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 EPHX3Q9H6B9 360 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 LMBRD1Q9NUN5 540 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 HCFC1R1Q9NWW0 138 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 ITGA11Q9UKX5 1188 aa6.2□□□□□ -1.42
HMGB3P24-201ENST00000433260 C2CD4DB7Z1M9 353 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 CETN3O15182 167 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 ATP2C2O75185 946 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 LRRN2O75325 713 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 SOAT2O75908 522 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 LRG1P02750 347 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 C4BPAP04003 597 aaKnown RBP6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 TRIM49P0CI25 452 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 TRIM49CP0CI26 452 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 ATF2P15336 505 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 PTPN2P17706 415 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 CCNE1P24864 410 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 LMO2P25791 158 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 PNPLA4P41247 253 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 GCLMP48507 274 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 AARSP49588 968 aaKnown RBP eCLIP6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 CDH8P55286 799 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 ZP2Q05996 745 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 TWF1Q12792 350 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 DUSP4Q13115 394 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 GPR17Q13304 367 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 STIM1Q13586 685 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 MORC3Q14149 939 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 AGERQ15109 404 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 SOWAHAQ2M3V2 549 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 UVSSAQ2YD98 709 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 C1orf220Q5T0J3 134 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 TCERG1LQ5VWI1 586 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 CENPPQ6IPU0 288 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 CCDC149Q6ZUS6 474 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 OSTM1Q86WC4 334 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 RNF135Q8IUD6 432 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 SLC9A9Q8IVB4 645 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 FAM186BQ8IYM0 893 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 PDCL2Q8N4E4 241 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 LRRC52Q8N7C0 313 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 ATAD1Q8NBU5 361 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 OR6B3Q8NGW1 331 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 OR10T2Q8NGX3 314 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 SPATA20Q8TB22 786 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 FAM200AQ8TCP9 573 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 GPR152Q8TDT2 470 aa6.19□□□□□ -1.42
HMGB3P24-201ENST00000433260 NELFBQ8WX92 580 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms