RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 FIZ1Q96SL8 496 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 CCSER1Q9C0I3 900 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 IL21Q9HBE4 155 aa16.09■□□□□ 0.17
PRKDC-203ENST00000432581 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.08■□□□□ 0.16
PRKDC-203ENST00000432581 ATF6P18850 670 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 PLCG1P19174 1290 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 ACOT2P49753 483 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 TNK2Q07912 1038 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 MCM6Q14566 821 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 HEATR6Q6AI08 1181 aaKnown RBP16.08■□□□□ 0.16
PRKDC-203ENST00000432581 CEP68Q76N32 757 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 WDR5BQ86VZ2 330 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 DCP1BQ8IZD4 617 aaKnown RBP16.08■□□□□ 0.16
PRKDC-203ENST00000432581 LRRC15Q8TF66 581 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 TMX3Q96JJ7 454 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 PYM1Q9BRP8 204 aaKnown RBP16.08■□□□□ 0.16
PRKDC-203ENST00000432581 ST6GALNAC4Q9H4F1 302 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 DPP3Q9NY33 737 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 AGO2Q9UKV8 859 aaKnown RBP16.08■□□□□ 0.16
PRKDC-203ENST00000432581 STYXL1Q9Y6J8 313 aa16.08■□□□□ 0.16
PRKDC-203ENST00000432581 ANKRD63C9JTQ0 380 aa16.07■□□□□ 0.16
PRKDC-203ENST00000432581 ADRB1P08588 477 aa16.07■□□□□ 0.16
PRKDC-203ENST00000432581 HAPLN1P10915 354 aaPredicted RBP16.07■□□□□ 0.16
PRKDC-203ENST00000432581 DDX6P26196 483 aaKnown RBP eCLIP16.07■□□□□ 0.16
PRKDC-203ENST00000432581 NMT1P30419 496 aaKnown RBP16.07■□□□□ 0.16
PRKDC-203ENST00000432581 AVPR1AP37288 418 aa16.07■□□□□ 0.16
PRKDC-203ENST00000432581 SRSF5Q13243 272 aaKnown RBP16.07■□□□□ 0.16
PRKDC-203ENST00000432581 KARSQ15046 597 aaKnown RBP16.07■□□□□ 0.16
PRKDC-203ENST00000432581 NT5DC4Q86YG4 428 aa16.07■□□□□ 0.16
PRKDC-203ENST00000432581 CMTM8Q8IZV2 173 aa16.07■□□□□ 0.16
PRKDC-203ENST00000432581 LARP4BQ92615 738 aaKnown RBP16.07■□□□□ 0.16
PRKDC-203ENST00000432581 SLC46A2Q9BY10 475 aa16.07■□□□□ 0.16
PRKDC-203ENST00000432581 MYH11P35749 1972 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 CCDC163A0A0D9SF12 145 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 SOBPA7XYQ1 873 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 IL18RAPO95256 599 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 PNPLA4P41247 253 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 AMPD2Q01433 879 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 GRSF1Q12849 480 aaKnown RBP eCLIP16.06■□□□□ 0.16
PRKDC-203ENST00000432581 POSTNQ15063 836 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 SV2CQ496J9 727 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 C8orf34Q49A92 452 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 WSCD1Q658N2 575 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 LRRTM3Q86VH5 581 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 FAM160A2Q8N612 972 aaPredicted RBP16.06■□□□□ 0.16
PRKDC-203ENST00000432581 KRI1Q8N9T8 703 aaKnown RBP16.06■□□□□ 0.16
PRKDC-203ENST00000432581 GIPC2Q8TF65 315 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 DDX1Q92499 740 aaKnown RBP16.06■□□□□ 0.16
PRKDC-203ENST00000432581 HVCN1Q96D96 273 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 ZNF560Q96MR9 790 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 FAM83CQ9BQN1 747 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 SMG9Q9H0W8 520 aaKnown RBP16.06■□□□□ 0.16
PRKDC-203ENST00000432581 KIF9Q9HAQ2 790 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 GKN1Q9NS71 199 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 C2orf42Q9NWW7 574 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 ABI2Q9NYB9 513 aaPredicted RBP16.06■□□□□ 0.16
PRKDC-203ENST00000432581 PCDHB5Q9Y5E4 795 aa16.06■□□□□ 0.16
PRKDC-203ENST00000432581 KPNA7A9QM74 516 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 ATG13O75143 517 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 DDIT3P35638 169 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 TSPY1Q01534 308 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 BFSP1Q12934 665 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 RUNX3Q13761 415 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 NFE2Q16621 373 aaPredicted RBP16.05■□□□□ 0.16
PRKDC-203ENST00000432581 ZC2HC1CQ53FD0 456 aaPredicted RBP16.05■□□□□ 0.16
PRKDC-203ENST00000432581 TMEM196Q5HYL7 178 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 PPM1JQ5JR12 505 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 BRAPQ7Z569 592 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 POMGNT1Q8WZA1 660 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 LOXL4Q96JB6 756 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 SMC3Q9UQE7 1217 aa16.05■□□□□ 0.16
PRKDC-203ENST00000432581 TISP43B9A030 160 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 TRDMT1O14717 391 aaKnown RBP16.04■□□□□ 0.16
PRKDC-203ENST00000432581 EXTL3O43909 919 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 F11P03951 625 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 CSH1P0DML2 217 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 CSH2P0DML3 217 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 HMGA1P17096 107 aaKnown RBP16.04■□□□□ 0.16
PRKDC-203ENST00000432581 NLRP12P59046 1061 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 LARP1BQ659C4 914 aaKnown RBP16.04■□□□□ 0.16
PRKDC-203ENST00000432581 CRELD2Q6UXH1 353 aaPredicted RBP16.04■□□□□ 0.16
PRKDC-203ENST00000432581 ZNF720Q7Z2F6 126 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 CACNA2D4Q7Z3S7 1137 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 TMEM150AQ86TG1 271 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 EFCAB13Q8IY85 973 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 MAB21L3Q8N8X9 362 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 GAB3Q8WWW8 586 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 MRPS31Q92665 395 aaKnown RBP16.04■□□□□ 0.16
PRKDC-203ENST00000432581 USP13Q92995 863 aaPredicted RBP16.04■□□□□ 0.16
PRKDC-203ENST00000432581 EXOC4Q96A65 974 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 HPS4Q9NQG7 708 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 TDP1Q9NUW8 608 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 SEL1LQ9UBV2 794 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 SLC8A2Q9UPR5 921 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 EXOC7Q9UPT5 735 aa16.04■□□□□ 0.16
PRKDC-203ENST00000432581 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.04■□□□□ 0.16
PRKDC-203ENST00000432581 GDF9O60383 454 aa16.03■□□□□ 0.16
PRKDC-203ENST00000432581 RPP40O75818 363 aaKnown RBP16.03■□□□□ 0.16
PRKDC-203ENST00000432581 ADSSP30520 456 aa16.03■□□□□ 0.16
PRKDC-203ENST00000432581 CDR1P51861 262 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms