RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 CGRRF1Q99675 332 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 GPRC5CQ9NQ84 441 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 GKN1Q9NS71 199 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 SUN2Q9UH99 717 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 EXTL3O43909 919 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 CAVIN2O95810 425 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 CER1O95813 267 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 ITGB3P05106 788 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 POLR2EP19388 210 aaKnown RBP4.89□□□□□ -1.63
UBE4A-202ENST00000431736 OXTRP30559 389 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 ARRB1P49407 418 aaPredicted RBP4.89□□□□□ -1.63
UBE4A-202ENST00000431736 ROR1Q01973 937 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 GHRHRQ02643 423 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 SPEM2Q0P670 501 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 CLLU1OSQ5K130 101 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 CCDC181Q5TID7 509 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 SASS6Q6UVJ0 657 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 VSTM1Q6UX27 236 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 RASEFQ8IZ41 740 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 RAD54LQ92698 747 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 NT5C1BQ96P26 610 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 DHX33Q9H6R0 707 aaKnown RBP4.89□□□□□ -1.63
UBE4A-202ENST00000431736 METTL14Q9HCE5 456 aaKnown RBP4.89□□□□□ -1.63
UBE4A-202ENST00000431736 ZDHHC4Q9NPG8 344 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 SLC27A5Q9Y2P5 690 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 KPNA7A9QM74 516 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 NFICP08651 508 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 ACOT2P49753 483 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 PSEN1P49768 467 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 FXR2P51116 673 aaKnown RBP eCLIP4.89□□□□□ -1.63
UBE4A-202ENST00000431736 DUSP3P51452 185 aaPredicted RBP4.89□□□□□ -1.63
UBE4A-202ENST00000431736 RPL6Q02878 288 aaKnown RBP4.89□□□□□ -1.63
UBE4A-202ENST00000431736 KDSRQ06136 332 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 MGAT3Q09327 533 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 PEX6Q13608 980 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 CUL4BQ13620 913 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 WDR72Q3MJ13 1102 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 ARL13BQ3SXY8 428 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 FAM46CQ5VWP2 391 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 PRPF39Q86UA1 669 aaKnown RBP4.89□□□□□ -1.63
UBE4A-202ENST00000431736 CATSPER3Q86XQ3 398 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 SPEM1Q8N4L4 309 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 PRCCQ92733 491 aaPredicted RBP4.89□□□□□ -1.63
UBE4A-202ENST00000431736 EDEM2Q9BV94 578 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 EIF2AQ9BY44 585 aaKnown RBP4.89□□□□□ -1.63
UBE4A-202ENST00000431736 OSBPL6Q9BZF3 934 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 CDH9Q9ULB4 789 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 TBX20Q9UMR3 447 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 PCDHB11Q9Y5F2 797 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 PLXNB2O15031 1838 aa4.89□□□□□ -1.63
UBE4A-202ENST00000431736 PRR23AA6NEV1 266 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 H0Y626 953 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 GOLGA6L19H0YKK7 550 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 SLC37A4O43826 429 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 JAK2O60674 1132 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 AP1G2O75843 785 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 TRIM16O95361 564 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 C1RP00736 705 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 KRT9P35527 623 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 MAPK8IP2Q13387 824 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-202ENST00000431736 PON2Q15165 354 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 PHLDB3Q6NSJ2 640 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 PPP4R3CPQ6ZMV5 832 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 SFR1Q86XK3 245 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 BBS2Q9BXC9 721 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 DMAP1Q9NPF5 467 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-202ENST00000431736 DNAJB4Q9UDY4 337 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 SMIM28A0A1B0GU29 152 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 C1QTNF3-AMACRE9PGA6 284 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 CTAGE5O15320 804 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 CHADO15335 359 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 GPR32O75388 356 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 LUC7L3O95232 432 aaKnown RBP4.88□□□□□ -1.63
UBE4A-202ENST00000431736 HMBSP08397 361 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 GTF2F1P35269 517 aaKnown RBP eCLIP4.88□□□□□ -1.63
UBE4A-202ENST00000431736 PSMC2P35998 433 aaKnown RBP4.88□□□□□ -1.63
UBE4A-202ENST00000431736 CCINQ13939 588 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 C10orf76Q5T2E6 689 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 DNAJB7Q7Z6W7 309 aaPredicted RBP4.88□□□□□ -1.63
UBE4A-202ENST00000431736 MRPL10Q7Z7H8 261 aaKnown RBP4.88□□□□□ -1.63
UBE4A-202ENST00000431736 UNC45BQ8IWX7 931 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 CAMKK1Q8N5S9 505 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 ZBTB10Q96DT7 871 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 SMARCD1Q96GM5 515 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 SUSD3Q96L08 255 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 CDT1Q9H211 546 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 FAM204AQ9H8W3 233 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 DNAJC17Q9NVM6 304 aaKnown RBP4.88□□□□□ -1.63
UBE4A-202ENST00000431736 MTRRQ9UBK8 725 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 ATICP31939 592 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 MAN1A1P33908 653 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 MBTD1Q05BQ5 628 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 SPAG1Q07617 926 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 DRP2Q13474 957 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 EMC10Q5UCC4 262 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 CCDC112Q8NEF3 446 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 TDP1Q9NUW8 608 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 TFIP11Q9UBB9 837 aaKnown RBP4.88□□□□□ -1.63
UBE4A-202ENST00000431736 PCDHB4Q9Y5E5 795 aa4.88□□□□□ -1.63
UBE4A-202ENST00000431736 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms