RNA–Protein interactions for RNA: ENST00000431413.5

HERC3-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 5

Gene HERC3, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-206ENST00000431413 C1orf127Q8N9H9 656 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 ATRIPQ8WXE1 791 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 FAM3CQ92520 227 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 ANKRD36BP1Q96IX9 119 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 CBWD1Q9BRT8 395 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 IER2Q9BTL4 223 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 TRIM9Q9C026 710 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 PCIF1Q9H4Z3 704 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 MAGEF1Q9HAY2 307 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 KIAA1586Q9HCI6 787 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 KBTBD4Q9NVX7 518 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 OBP2AQ9NY56 170 aa16.32■□□□□ 0.2
HERC3-206ENST00000431413 ABI2Q9NYB9 513 aaPredicted RBP16.32■□□□□ 0.2
HERC3-206ENST00000431413 NDRG2Q9UN36 371 aaKnown RBP16.32■□□□□ 0.2
HERC3-206ENST00000431413 ZNF233A6NK53 670 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 HAPLN1P10915 354 aaPredicted RBP16.31■□□□□ 0.2
HERC3-206ENST00000431413 CSTF1Q05048 431 aaKnown RBP16.31■□□□□ 0.2
HERC3-206ENST00000431413 FCHO2Q0JRZ9 810 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 BFSP1Q12934 665 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 MYO1EQ12965 1108 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 E2F4Q16254 413 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 ARHGAP29Q52LW3 1261 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 SPATA18Q8TC71 538 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 DHX58Q96C10 678 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 LPIN3Q9BQK8 851 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 ACBD6Q9BR61 282 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 TASP1Q9H6P5 420 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 C8orf33Q9H7E9 229 aaPredicted RBP16.31■□□□□ 0.2
HERC3-206ENST00000431413 PDE11AQ9HCR9 933 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 THG1LQ9NWX6 298 aaKnown RBP16.31■□□□□ 0.2
HERC3-206ENST00000431413 PCDHGA2Q9Y5H1 932 aa16.31■□□□□ 0.2
HERC3-206ENST00000431413 MIA3Q5JRA6 1907 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 EIF3DO15371 548 aaKnown RBP eCLIP16.3■□□□□ 0.2
HERC3-206ENST00000431413 TNNC2P02585 160 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 ATF6P18850 670 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 PCSK1P29120 753 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 WEE1P30291 646 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 LHX1P48742 406 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 KPNA1P52294 538 aaPredicted RBP16.3■□□□□ 0.2
HERC3-206ENST00000431413 RPL10AP62906 217 aaKnown RBP16.3■□□□□ 0.2
HERC3-206ENST00000431413 PLCB2Q00722 1185 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 STXBP5Q5T5C0 1151 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 ATL3Q6DD88 541 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 LRRTM3Q86VH5 581 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 MAML2Q8IZL2 1156 aaPredicted RBP16.3■□□□□ 0.2
HERC3-206ENST00000431413 PDCL2Q8N4E4 241 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 TOP6BLQ8N6T0 577 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 ZSWIM2Q8NEG5 633 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 GIPC2Q8TF65 315 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 HINFPQ9BQA5 517 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 FAM126AQ9BYI3 521 aaPredicted RBP16.3■□□□□ 0.2
HERC3-206ENST00000431413 FGFBP2Q9BYJ0 223 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 GDAP2Q9NXN4 497 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 FAM13BQ9NYF5 915 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 SNX9Q9Y5X1 595 aa16.3■□□□□ 0.2
HERC3-206ENST00000431413 PRPF40AO75400 957 aaKnown RBP16.29■□□□□ 0.2
HERC3-206ENST00000431413 CSH1P0DML2 217 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 CSH2P0DML3 217 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 ZSCAN22P10073 491 aaPredicted RBP16.29■□□□□ 0.2
HERC3-206ENST00000431413 CCNE1P24864 410 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 ME1P48163 572 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 WNT7BP56706 349 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 DUOXA2Q1HG44 320 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 FAM26FQ5R3K3 315 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 FOXD4L5Q5VV16 416 aaPredicted RBP16.29■□□□□ 0.2
HERC3-206ENST00000431413 CNNM4Q6P4Q7 775 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 MAMSTRQ6ZN01 415 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 DPH6Q7L8W6 267 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 LEO1Q8WVC0 666 aaPredicted RBP16.29■□□□□ 0.2
HERC3-206ENST00000431413 FOXD4L4Q8WXT5 416 aaPredicted RBP16.29■□□□□ 0.2
HERC3-206ENST00000431413 RUBCNQ92622 972 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 MTMR12Q9C0I1 747 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 CHRDQ9H2X0 955 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 LMAN1LQ9HAT1 526 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 ABCB6Q9NP58 842 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 INTS13Q9NVM9 706 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 ZSCAN32Q9NX65 697 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 DDX43Q9NXZ2 648 aaKnown RBP16.29■□□□□ 0.2
HERC3-206ENST00000431413 CFAP45Q9UL16 551 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 L1RE1Q9UN81 338 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 SCN1AP35498 2009 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 MYO15AQ9UKN7 3530 aa16.29■□□□□ 0.2
HERC3-206ENST00000431413 SHISA7A6NL88 538 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 SOBPA7XYQ1 873 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 ARNTLO00327 626 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 F13A1P00488 732 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 DDX6P26196 483 aaKnown RBP eCLIP16.28■□□□□ 0.2
HERC3-206ENST00000431413 AVPR1AP37288 418 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 CDR1P51861 262 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 NRLP54845 237 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 SNRPFP62306 86 aaKnown RBP16.28■□□□□ 0.2
HERC3-206ENST00000431413 CYP4F8P98187 520 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 MTAPQ13126 283 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 FZD5Q13467 585 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 LRRC32Q14392 662 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 INTS6LQ5JSJ4 861 aaKnown RBP16.28■□□□□ 0.2
HERC3-206ENST00000431413 SHC4Q6S5L8 630 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 HS2ST1Q7LGA3 356 aa16.28■□□□□ 0.2
HERC3-206ENST00000431413 RALGPS2Q86X27 583 aaPredicted RBP16.28■□□□□ 0.2
HERC3-206ENST00000431413 ADGRF2Q8IZF7 708 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms