RNA–Protein interactions for RNA: ENST00000431374.6

TSPAN9-203, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-203ENST00000431374 EPHB3P54753 998 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 INTS6LQ5JSJ4 861 aaKnown RBP16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 CYP4A22Q5TCH4 519 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 TDRD10Q5VZ19 366 aaKnown RBP16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 CEP135Q66GS9 1140 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 POTEHQ6S545 545 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 PARM1Q6UWI2 310 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 TMC8Q8IU68 726 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 ELOA2Q8IYF1 753 aaPredicted RBP16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 SLC44A3Q8N4M1 653 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 SPPL2BQ8TCT7 592 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 ERCC4Q92889 916 aaPredicted RBP16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 FGF14Q92915 247 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 PBXIP1Q96AQ6 731 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 PKMYT1Q99640 499 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 SEPT5Q99719 369 aaPredicted RBP16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 LRRC3Q9BY71 257 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 XYLT2Q9H1B5 865 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 HOOK1Q9UJC3 728 aaKnown RBP16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 FRMD4BQ9Y2L6 1034 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 PCDHA5Q9Y5H7 936 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 TSC2P49815 1807 aa16.42■□□□□ 0.22
TSPAN9-203ENST00000431374 MAPK13O15264 365 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 HCRTO43612 131 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 KINO60870 393 aaKnown RBP16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 MOSPD3O75425 235 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 AKAP3O75969 853 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 C4BPAP04003 597 aaKnown RBP16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 HAPLN1P10915 354 aaPredicted RBP16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 ATF6P18850 670 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 WARSP23381 471 aaKnown RBP16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 PCSK1P29120 753 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 MYL6P60660 151 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 DLG4P78352 724 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 TRPC3Q13507 836 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 NFE2Q16621 373 aaPredicted RBP16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 MGAT5BQ3V5L5 792 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 MTSS1LQ765P7 747 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 TMC2Q8TDI7 906 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 SMARCE1Q969G3 411 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 PSMG2Q969U7 264 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 MCRS1Q96EZ8 462 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 RPP25Q9BUL9 199 aaKnown RBP16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 ABI2Q9NYB9 513 aaPredicted RBP16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 ASB3Q9Y575 518 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 PCDHB5Q9Y5E4 795 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 TCHHQ07283 1943 aa16.41■□□□□ 0.22
TSPAN9-203ENST00000431374 PHACTR2O75167 634 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 PDGFBP01127 241 aaPredicted RBP16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 SRFP11831 508 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 MYL4P12829 197 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 RPL13P26373 211 aaKnown RBP16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 ATICP31939 592 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 BIRC3Q13489 604 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 CCDC142Q17RM4 750 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 EDRF1Q3B7T1 1238 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 COBLL1Q53SF7 1204 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 C1orf220Q5T0J3 134 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 ZNF658Q5TYW1 1059 aaPredicted RBP16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 DNAJB7Q7Z6W7 309 aaPredicted RBP16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 FBXL6Q8N531 539 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 SHKBP1Q8TBC3 707 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 SYAP1Q96A49 352 aaPredicted RBP16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 MMS19Q96T76 1030 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 LPIN3Q9BQK8 851 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 MRPL45Q9BRJ2 306 aaKnown RBP16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 VRTNQ9H8Y1 702 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 ABCB6Q9NP58 842 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 HCN4Q9Y3Q4 1203 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 ZDBF2Q9HCK1 2354 aa16.4■□□□□ 0.22
TSPAN9-203ENST00000431374 MYBPHLA2RUH7 354 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 TACC1O75410 805 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 VNN1O95497 513 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 FAM163BP0C2L3 166 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 LMO2P25791 158 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 PRCPP42785 496 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 TNNC1P63316 161 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 ENPEPQ07075 957 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 ADAM9Q13443 819 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 NCOA4Q13772 614 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 WDR72Q3MJ13 1102 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 ZACNQ401N2 412 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 FAM171BQ6P995 826 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 INTS8Q75QN2 995 aaKnown RBP16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 ITIH5Q86UX2 942 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 FAM186BQ8IYM0 893 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 SYT15Q9BQS2 421 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 ZNF334Q9HCZ1 680 aaPredicted RBP16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 GTF3C4Q9UKN8 822 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 CDH9Q9ULB4 789 aa16.39■□□□□ 0.21
TSPAN9-203ENST00000431374 DOCK8Q8NF50 2099 aa16.38■□□□□ 0.21
TSPAN9-203ENST00000431374 IKBKBO14920 756 aa16.38■□□□□ 0.21
TSPAN9-203ENST00000431374 ECI2O75521 394 aa16.38■□□□□ 0.21
TSPAN9-203ENST00000431374 GJA1P17302 382 aa16.38■□□□□ 0.21
TSPAN9-203ENST00000431374 FCARP24071 287 aa16.38■□□□□ 0.21
TSPAN9-203ENST00000431374 PSMC2P35998 433 aaKnown RBP16.38■□□□□ 0.21
TSPAN9-203ENST00000431374 VAMP7P51809 220 aa16.38■□□□□ 0.21
TSPAN9-203ENST00000431374 PSMC1P62191 440 aaKnown RBP16.38■□□□□ 0.21
TSPAN9-203ENST00000431374 VEPH1Q14D04 833 aa16.38■□□□□ 0.21
TSPAN9-203ENST00000431374 TEAD2Q15562 447 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms