RNA–Protein interactions for RNA: ENST00000430085.5

CALD1-207, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-207ENST00000430085 MAP9Q49MG5 647 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 SGO2Q562F6 1265 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 SEL1L2Q5TEA6 688 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 KLHL7Q8IXQ5 586 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.17■□□□□ 0.02
CALD1-207ENST00000430085 CD101Q93033 1021 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 KIAA1257Q9ULG3 409 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 STRIP2Q9ULQ0 834 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 PCDHA3Q9Y5H8 950 aa15.17■□□□□ 0.02
CALD1-207ENST00000430085 RRP9O43818 475 aaKnown RBP15.16■□□□□ 0.02
CALD1-207ENST00000430085 ZMYND10O75800 440 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 ZRANB2O95218 330 aaKnown RBP eCLIP15.16■□□□□ 0.02
CALD1-207ENST00000430085 PNPLA4P41247 253 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 MARCKSL1P49006 195 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 PEX5P50542 639 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 ACLYP53396 1101 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 SLC7A5Q01650 507 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 MGAT3Q09327 533 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 FBXO47Q5MNV8 452 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 DNAJC24Q6P3W2 148 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 DPH6Q7L8W6 267 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 WDTC1Q8N5D0 677 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 FEZF2Q8TBJ5 459 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 ARMC5Q96C12 935 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 ZNF333Q96JL9 665 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 PLVAPQ9BX97 442 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 TRIM7Q9C029 511 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 UNC93B1Q9H1C4 597 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 FAM105AQ9NUU6 356 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 STIM2Q9P246 746 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.16■□□□□ 0.02
CALD1-207ENST00000430085 PDCD11Q14690 1871 aaKnown RBP15.16■□□□□ 0.02
CALD1-207ENST00000430085 FRMPD3Q5JV73 1810 aa15.16■□□□□ 0.02
CALD1-207ENST00000430085 GOLGA6L10A0A0M3HER8 536 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 M0QYV0 167 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 PROSCO94903 275 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 CYP3A5P20815 502 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 RWDD2BP57060 319 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 MRPS25P82663 173 aaKnown RBP15.15■□□□□ 0.02
CALD1-207ENST00000430085 PTK7Q13308 1070 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 HDAC7Q8WUI4 952 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 GLT1D1Q96MS3 346 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 SYNCQ9H7C4 482 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 LCMT1Q9UIC8 334 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.15■□□□□ 0.02
CALD1-207ENST00000430085 MOXD2PA6NHM9 499 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 PIRO00625 290 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 ATP8B1O43520 1251 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 MICAL2O94851 1124 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 ITGA4P13612 1032 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 TAP1Q03518 808 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 CNGA2Q16280 664 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 DCUN1D2Q6PH85 259 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 CPNE8Q86YQ8 564 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 ARRDC4Q8NCT1 418 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 MRPL45Q9BRJ2 306 aaKnown RBP15.15■□□□□ 0.02
CALD1-207ENST00000430085 HMX1Q9NP08 348 aaPredicted RBP15.15■□□□□ 0.02
CALD1-207ENST00000430085 IP6K2Q9UHH9 426 aa15.15■□□□□ 0.02
CALD1-207ENST00000430085 DMGDHQ9UI17 866 aaKnown RBP15.15■□□□□ 0.02
CALD1-207ENST00000430085 O00370 1275 aa15.14■□□□□ 0.01
CALD1-207ENST00000430085 CCL5P13501 91 aa15.14■□□□□ 0.01
CALD1-207ENST00000430085 TAF6P49848 677 aa15.14■□□□□ 0.01
CALD1-207ENST00000430085 PAK2Q13177 524 aa15.14■□□□□ 0.01
CALD1-207ENST00000430085 STILQ15468 1287 aa15.14■□□□□ 0.01
CALD1-207ENST00000430085 SV2CQ496J9 727 aa15.14■□□□□ 0.01
CALD1-207ENST00000430085 BEND6Q5SZJ8 279 aaPredicted RBP15.14■□□□□ 0.01
CALD1-207ENST00000430085 CYP4A22Q5TCH4 519 aa15.14■□□□□ 0.01
CALD1-207ENST00000430085 OR6B3Q8NGW1 331 aa15.14■□□□□ 0.01
CALD1-207ENST00000430085 DNAI2Q9GZS0 605 aa15.14■□□□□ 0.01
CALD1-207ENST00000430085 TRMT13Q9NUP7 481 aaKnown RBP15.14■□□□□ 0.01
CALD1-207ENST00000430085 KPNA7A9QM74 516 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 HEXIM1O94992 359 aaKnown RBP15.13■□□□□ 0.01
CALD1-207ENST00000430085 GJB6O95452 261 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 GHRP10912 638 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 PPP2R5EQ16537 467 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 PTPN20Q4JDL3 420 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 CCNI2Q6ZMN8 369 aaPredicted RBP15.13■□□□□ 0.01
CALD1-207ENST00000430085 ADAT2Q7Z6V5 191 aaKnown RBP15.13■□□□□ 0.01
CALD1-207ENST00000430085 IFT20Q8IY31 132 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 C3orf20Q8ND61 904 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 C18orf8Q96DM3 657 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 MCEEQ96PE7 176 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 HINFPQ9BQA5 517 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 TSEN34Q9BSV6 310 aaKnown RBP15.13■□□□□ 0.01
CALD1-207ENST00000430085 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.13■□□□□ 0.01
CALD1-207ENST00000430085 DDX47Q9H0S4 455 aaKnown RBP15.13■□□□□ 0.01
CALD1-207ENST00000430085 AGO3Q9H9G7 860 aaKnown RBP15.13■□□□□ 0.01
CALD1-207ENST00000430085 GOLGA2P5Q9HBQ8 144 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 SLC38A7Q9NVC3 462 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 SCN1AP35498 2009 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 TMEM191CA6NGB0 347 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 SART1O43290 800 aaKnown RBP15.13■□□□□ 0.01
CALD1-207ENST00000430085 RAD51CO43502 376 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 PYGMP11217 842 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 CD52P31358 61 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 MAN1A1P33908 653 aa15.13■□□□□ 0.01
CALD1-207ENST00000430085 SSR1P43307 286 aaKnown RBP15.13■□□□□ 0.01
CALD1-207ENST00000430085 RPL7AP62424 266 aaKnown RBP15.13■□□□□ 0.01
CALD1-207ENST00000430085 SOX4Q06945 474 aaPredicted RBP15.13■□□□□ 0.01
CALD1-207ENST00000430085 SOWAHAQ2M3V2 549 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms