RNA–Protein interactions for RNA: ENST00000428696.6

SGCE-204, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,409 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-204ENST00000428696 ATAD1Q8NBU5 361 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 SLC7A14Q8TBB6 771 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 RTP3Q9BQQ7 232 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 NIF3L1Q9GZT8 377 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 DZANK1Q9NVP4 752 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 ABI2Q9NYB9 513 aaPredicted RBP15.57■□□□□ 0.08
SGCE-204ENST00000428696 THEGQ9P2T0 379 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 CD207Q9UJ71 328 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 PRUNE2Q8WUY3 3088 aa15.57■□□□□ 0.08
SGCE-204ENST00000428696 TBC1D4O60343 1298 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 C8AP07357 584 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 WARSP23381 471 aaKnown RBP15.56■□□□□ 0.08
SGCE-204ENST00000428696 EEF1GP26641 437 aaKnown RBP15.56■□□□□ 0.08
SGCE-204ENST00000428696 TPM4P67936 248 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 CYP27A1Q02318 531 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 LRRTM3Q86VH5 581 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 EHBP1Q8NDI1 1231 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 KBTBD7Q8WVZ9 684 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 NT5C1BQ96P26 610 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 SEPT5Q99719 369 aaPredicted RBP15.56■□□□□ 0.08
SGCE-204ENST00000428696 LPIN3Q9BQK8 851 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 SYT15Q9BQS2 421 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 ACBD6Q9BR61 282 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 FUCA2Q9BTY2 467 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 INTS2Q9H0H0 1204 aaKnown RBP15.56■□□□□ 0.08
SGCE-204ENST00000428696 ZCWPW1Q9H0M4 648 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 SDCBP2Q9H190 292 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 NDST4Q9H3R1 872 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 PLEKHA4Q9H4M7 779 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 VRTNQ9H8Y1 702 aa15.56■□□□□ 0.08
SGCE-204ENST00000428696 GOLGA6L19H0YKK7 550 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 CCL16O15467 120 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 TACC1O75410 805 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 SEC24AO95486 1093 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 ATF2P15336 505 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 ASPAP45381 313 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 GPR17Q13304 367 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 KRT31Q15323 416 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 MGAT5BQ3V5L5 792 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 ZNF394Q53GI3 561 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 MDH1BQ5I0G3 518 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 TPGS2Q68CL5 300 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 TMEM184AQ6ZMB5 413 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 GBP6Q6ZN66 633 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 CCDC149Q6ZUS6 474 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 RRAGAQ7L523 313 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 ACOT1Q86TX2 421 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 SPATA2LQ8IUW3 424 aaPredicted RBP15.55■□□□□ 0.08
SGCE-204ENST00000428696 PPM1KQ8N3J5 372 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 FAM200AQ8TCP9 573 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 PCMTD1Q96MG8 357 aaPredicted RBP15.55■□□□□ 0.08
SGCE-204ENST00000428696 MED10Q9BTT4 135 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 TSPY26PQ9H489 355 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 CBX8Q9HC52 389 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 GCNT4Q9P109 453 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 AFF4Q9UHB7 1163 aaKnown RBP15.55■□□□□ 0.08
SGCE-204ENST00000428696 CDH9Q9ULB4 789 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 COQ4Q9Y3A0 265 aa15.55■□□□□ 0.08
SGCE-204ENST00000428696 MYBPHLA2RUH7 354 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 GABRDO14764 452 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 P4HA2O15460 535 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 SOAT2O75908 522 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 ABLIM3O94929 683 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 LRG1P02750 347 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 HOXB8P17481 243 aaPredicted RBP15.54■□□□□ 0.08
SGCE-204ENST00000428696 PTPN1P18031 435 aaKnown RBP15.54■□□□□ 0.08
SGCE-204ENST00000428696 TRIM21P19474 475 aaKnown RBP15.54■□□□□ 0.08
SGCE-204ENST00000428696 NDST1P52848 882 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 MCCD1P59942 119 aaPredicted RBP15.54■□□□□ 0.08
SGCE-204ENST00000428696 MRPS5P82675 430 aaKnown RBP15.54■□□□□ 0.08
SGCE-204ENST00000428696 KCNC3Q14003 757 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 CCDC142Q17RM4 750 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 AAK1Q2M2I8 961 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 INTS6LQ5JSJ4 861 aaKnown RBP15.54■□□□□ 0.08
SGCE-204ENST00000428696 CDKAL1Q5VV42 579 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 SYCE2Q6PIF2 218 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 LUZP1Q86V48 1076 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 DHX40Q8IX18 779 aaKnown RBP15.54■□□□□ 0.08
SGCE-204ENST00000428696 ARID3AQ99856 593 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 BPIFA3Q9BQP9 254 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 DNAI2Q9GZS0 605 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 DPEP3Q9H4B8 488 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 SFXN1Q9H9B4 322 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 CYP3A43Q9HB55 503 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 TMLHEQ9NVH6 421 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 CDH22Q9UJ99 828 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 FBXW11Q9UKB1 542 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 PCDHB5Q9Y5E4 795 aa15.54■□□□□ 0.08
SGCE-204ENST00000428696 ZMYND10O75800 440 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 SLC9A1P19634 815 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 ALDH1A3P47895 512 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 KCNQ1P51787 676 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 CUL2Q13617 745 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 NCAPHQ15003 741 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 NFE2Q16621 373 aaPredicted RBP15.53■□□□□ 0.08
SGCE-204ENST00000428696 EXOC3L4Q17RC7 722 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 ATAT1Q5SQI0 421 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 FKBP15Q5T1M5 1219 aa15.53■□□□□ 0.08
SGCE-204ENST00000428696 PTCRAQ6ISU1 281 aaPredicted RBP15.53■□□□□ 0.08
SGCE-204ENST00000428696 SCN4BQ8IWT1 228 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms