RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 PCDH15Q96QU1 1955 aa13.01□□□□□ -0.33
DDX39B-208ENST00000428098 KIAA1549LQ6ZVL6 1849 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 MTMR11A4FU01 709 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 TRABD2BA6NFA1 517 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 J3QKU1 62 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 FGF19O95750 216 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 KCNE1P15382 129 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 IFNAR1P17181 557 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 ITPKBP27987 946 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 MARCKSP29966 332 aaPredicted RBP13□□□□□ -0.33
DDX39B-208ENST00000428098 MCM4P33991 863 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 SEC13P55735 322 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 DUOXA1Q1HG43 343 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 TSGA10IPQ3SY00 556 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 ATF7IP2Q5U623 682 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 SCUBE3Q8IX30 993 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 MAB21L3Q8N8X9 362 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 BRF1Q92994 677 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 AIFM3Q96NN9 605 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 KIFC3Q9BVG8 833 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 SLC38A7Q9NVC3 462 aa13□□□□□ -0.33
DDX39B-208ENST00000428098 CIZ1Q9ULV3 898 aaPredicted RBP13□□□□□ -0.33
DDX39B-208ENST00000428098 USP9XQ93008 2570 aaPredicted RBP13□□□□□ -0.33
DDX39B-208ENST00000428098 MGAQ8IWI9 3026 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 NID2Q14112 1375 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 M0QZQ0 153 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 CBFA2T3O75081 653 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 LARGE1O95461 756 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 CHRM1P11229 460 aaPredicted RBP12.99□□□□□ -0.33
DDX39B-208ENST00000428098 NMT1P30419 496 aaKnown RBP12.99□□□□□ -0.33
DDX39B-208ENST00000428098 GRM5P41594 1212 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 CCT2P78371 535 aaKnown RBP12.99□□□□□ -0.33
DDX39B-208ENST00000428098 YWHAHQ04917 246 aaPredicted RBP12.99□□□□□ -0.33
DDX39B-208ENST00000428098 CAMK2BQ13554 666 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 LYSMD4Q5XG99 296 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 TXNDC8Q6A555 127 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 Q6ZUG5 572 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 TMPRSS7Q7RTY8 843 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 SFTPA1Q8IWL2 248 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 HNRNPABQ99729 332 aaKnown RBP12.99□□□□□ -0.33
DDX39B-208ENST00000428098 C2orf40Q9H1Z8 148 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 PTPRHQ9HD43 1115 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 ANO2Q9NQ90 1003 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 TDP1Q9NUW8 608 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 MMP17Q9ULZ9 603 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 PCDHB9Q9Y5E1 797 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 PTPRQQ9UMZ3 2332 aa12.99□□□□□ -0.33
DDX39B-208ENST00000428098 MARCH6O60337 910 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 CCNT1O60563 726 aaKnown RBP12.98□□□□□ -0.33
DDX39B-208ENST00000428098 F11P03951 625 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 XRCC6P12956 609 aaKnown RBP eCLIP12.98□□□□□ -0.331e-69■□□□□ 8.2
DDX39B-208ENST00000428098 ATF6P18850 670 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 ATP2B1P20020 1258 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 PDGFRLQ15198 375 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 SPDYCQ5MJ68 293 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 PCSK4Q6UW60 755 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 ITIH5Q86UX2 942 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 CEP76Q8TAP6 659 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 PIP4K2CQ8TBX8 421 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 GIPC2Q8TF65 315 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 CDT1Q9H211 546 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 LINC00597Q9H2U6 94 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 PRORYQ9H606 182 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 KCNJ14Q9UNX9 436 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 TNFSF13BQ9Y275 285 aa12.98□□□□□ -0.33
DDX39B-208ENST00000428098 SPATA31C1P0DKV0 1188 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 CDC25CP30307 473 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 HOXD12P35452 270 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 AVPR1AP37288 418 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 OPRD1P41143 372 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 YARSP54577 528 aaKnown RBP12.97□□□□□ -0.33
DDX39B-208ENST00000428098 SLC14A1Q13336 389 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 AAMPQ13685 434 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 EARS2Q5JPH6 523 aaKnown RBP12.97□□□□□ -0.33
DDX39B-208ENST00000428098 EMC10Q5UCC4 262 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 CC2D1AQ6P1N0 951 aaPredicted RBP12.97□□□□□ -0.33
DDX39B-208ENST00000428098 KRT25Q7Z3Z0 450 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 NEK8Q86SG6 692 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 NAXDQ8IW45 347 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 DEPTORQ8TB45 409 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 CCDC94Q9BW85 323 aaPredicted RBP12.97□□□□□ -0.33
DDX39B-208ENST00000428098 TOPORSQ9NS56 1045 aaPredicted RBP12.97□□□□□ -0.33
DDX39B-208ENST00000428098 TOR4AQ9NXH8 423 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 KIAA1522Q9P206 1035 aaPredicted RBP12.97□□□□□ -0.33
DDX39B-208ENST00000428098 CNTN3Q9P232 1028 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 TUBGCP4Q9UGJ1 667 aa12.97□□□□□ -0.33
DDX39B-208ENST00000428098 APOBEC2Q9Y235 224 aaKnown RBP12.97□□□□□ -0.33
DDX39B-208ENST00000428098 HELZP42694 1942 aaKnown RBP12.97□□□□□ -0.33
DDX39B-208ENST00000428098 ATMQ13315 3056 aa12.96□□□□□ -0.33
DDX39B-208ENST00000428098 OR6C75A6NL08 312 aa12.96□□□□□ -0.33
DDX39B-208ENST00000428098 PYCARD-AS1I3L0S3 204 aa12.96□□□□□ -0.33
DDX39B-208ENST00000428098 SGK1O00141 431 aa12.96□□□□□ -0.33
DDX39B-208ENST00000428098 ARHGAP6O43182 974 aa12.96□□□□□ -0.33
DDX39B-208ENST00000428098 GCFC2P16383 781 aaKnown RBP12.96□□□□□ -0.33
DDX39B-208ENST00000428098 HMGA1P17096 107 aaKnown RBP12.96□□□□□ -0.33
DDX39B-208ENST00000428098 PDIA3P30101 505 aaKnown RBP12.96□□□□□ -0.33
DDX39B-208ENST00000428098 HSPA4P34932 840 aa12.96□□□□□ -0.33
DDX39B-208ENST00000428098 NAMPTP43490 491 aa12.96□□□□□ -0.33
DDX39B-208ENST00000428098 NLRP12P59046 1061 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms