RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 STX18Q9P2W9 335 aaKnown RBP13.76□□□□□ -0.21
SPG11-202ENST00000427534 GUCY2CP25092 1073 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 TRAPPC12Q8WVT3 735 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 A0A1W2PQC6 194 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 RTN2O75298 545 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 PTPN7P35236 360 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 LVRNQ6Q4G3 990 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 TMEM60Q9H2L4 133 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 WDCPQ9H6R7 721 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 EPB41L4AQ9HCS5 686 aaPredicted RBP13.76□□□□□ -0.21
SPG11-202ENST00000427534 PCDHB8Q9UN66 801 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 ACAT1P24752 427 aaKnown RBP13.76□□□□□ -0.21
SPG11-202ENST00000427534 PRKCQQ04759 706 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 FMR1Q06787 632 aaKnown RBP eCLIP13.76□□□□□ -0.213e-6■■■■□ 22.5
SPG11-202ENST00000427534 TOMM20Q15388 145 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 RNPC3Q96LT9 517 aaKnown RBP13.76□□□□□ -0.21
SPG11-202ENST00000427534 ZFP42Q96MM3 310 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 TSSK1BQ9BXA7 367 aa13.76□□□□□ -0.21
SPG11-202ENST00000427534 TMEM150BA6NC51 233 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 SLC37A4O43826 429 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 PARNO95453 639 aaKnown RBP13.75□□□□□ -0.21
SPG11-202ENST00000427534 IMPDH2P12268 514 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 KCNJ1P48048 391 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 GALNTL6Q49A17 601 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 SBK1Q52WX2 424 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 CALR3Q96L12 384 aaKnown RBP13.75□□□□□ -0.21
SPG11-202ENST00000427534 TDRKHQ9Y2W6 561 aaKnown RBP13.75□□□□□ -0.21
SPG11-202ENST00000427534 CYB561D2O14569 222 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 FAM200BP0CF97 657 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 ARFIP2P53365 341 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 ZSWIM2Q8NEG5 633 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 MED15Q96RN5 788 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 KCTD10Q9H3F6 313 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 TRIM33Q9UPN9 1127 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 DGAT1O75907 488 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 RAG1P15918 1043 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 PDIA5Q14554 519 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 COG1Q8WTW3 980 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.75□□□□□ -0.211e-6■■■■□ 19.3
SPG11-202ENST00000427534 CELF4Q9BZC1 486 aaKnown RBP13.75□□□□□ -0.21
SPG11-202ENST00000427534 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.75□□□□□ -0.21
SPG11-202ENST00000427534 DDIT4Q9NX09 232 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 NUDT5Q9UKK9 219 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 SLC39A10Q9ULF5 831 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 ANGPT1Q15389 498 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 DCP1BQ8IZD4 617 aaKnown RBP13.75□□□□□ -0.21
SPG11-202ENST00000427534 FAM151AQ8WW52 585 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 EDEM1Q92611 657 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 HES6Q96HZ4 224 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 APEX2Q9UBZ4 518 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.75□□□□□ -0.21
SPG11-202ENST00000427534 ODC1P11926 461 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 EPHB2P29323 1055 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 CARSP49589 748 aaKnown RBP13.75□□□□□ -0.21
SPG11-202ENST00000427534 ZNF177Q13360 481 aaPredicted RBP13.75□□□□□ -0.21
SPG11-202ENST00000427534 DGKZQ13574 1117 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 PDXDC1Q6P996 788 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 USP49Q70CQ1 688 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 PALB2Q86YC2 1186 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 FAM162AQ96A26 154 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 SLITRK1Q96PX8 696 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 RUSC1Q9BVN2 902 aa13.75□□□□□ -0.21
SPG11-202ENST00000427534 CNTNAP2Q9UHC6 1331 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 PXDNLA1KZ92 1463 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 DMTNQ08495 405 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 MROH9Q5TGP6 573 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 NT5DC3Q86UY8 548 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 WNT8AQ9H1J5 351 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 NDOR1Q9UHB4 597 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 TUBE1Q9UJT0 475 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 MKL2Q9ULH7 1088 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 CBX4O00257 560 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 ALDH1A2O94788 518 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 FMO5P49326 533 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 SGSM1Q2NKQ1 1148 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 TFAP2DQ7Z6R9 452 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 OOSP2Q86WS3 158 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 LCMT1Q9UIC8 334 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 TAF6LQ9Y6J9 622 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 E9PCH4 1651 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 SYNCRIPO60506 623 aaKnown RBP13.74□□□□□ -0.21
SPG11-202ENST00000427534 DARSP14868 501 aaKnown RBP13.74□□□□□ -0.21
SPG11-202ENST00000427534 ANTXR2P58335 489 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 CYGBQ8WWM9 190 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 EML4Q9HC35 981 aaKnown RBP13.74□□□□□ -0.21
SPG11-202ENST00000427534 SNTG2Q9NY99 539 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 PFASO15067 1338 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 ADCY3O60266 1144 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 CD4P01730 458 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 APOA4P06727 396 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 ARP10275 920 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 GHRP10912 638 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 RAP1GDS1P52306 607 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 ACTN3Q08043 901 aaPredicted RBP13.74□□□□□ -0.21
SPG11-202ENST00000427534 C16orf87Q6PH81 154 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 C16orf86Q6ZW13 317 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 TBC1D19Q8N5T2 526 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 SPATA18Q8TC71 538 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 FBXO10Q9UK96 956 aa13.74□□□□□ -0.21
SPG11-202ENST00000427534 GLRBP48167 497 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms