RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 UNKLQ9H9P5 680 aaKnown RBP6.09□□□□□ -1.43
LINC00458-202ENST00000427299 KCTD5Q9NXV2 234 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 SLC17A6Q9P2U8 582 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 USP25Q9UHP3 1055 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 LAS1LQ9Y4W2 734 aaKnown RBP6.09□□□□□ -1.43
LINC00458-202ENST00000427299 EID1Q9Y6B2 187 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 RIMS1Q86UR5 1692 aaKnown RBP6.09□□□□□ -1.43
LINC00458-202ENST00000427299 NRKQ7Z2Y5 1582 aa6.09□□□□□ -1.43
LINC00458-202ENST00000427299 LRRC7Q96NW7 1537 aa6.09□□□□□ -1.44
LINC00458-202ENST00000427299 ATP7BP35670 1465 aa6.09□□□□□ -1.44
LINC00458-202ENST00000427299 MAP2P11137 1827 aaKnown RBP6.09□□□□□ -1.44
LINC00458-202ENST00000427299 EVC2Q86UK5 1308 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 TRIM75PA6NK02 468 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 CGB1A6NKQ9 187 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 PLIN1O60240 522 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 POMCP01189 267 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 IL2RBP14784 551 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 ATP5JP18859 108 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 SLC6A2P23975 617 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 GPR3P46089 330 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 ALDH1A3P47895 512 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 VAV2P52735 878 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 KRT85P78386 507 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 OTUD7BQ6GQQ9 843 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 WDR63Q8IWG1 891 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 LNX2Q8N448 690 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 SH2D3CQ8N5H7 860 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 RUNDC1Q96C34 613 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 PTCD3Q96EY7 689 aaKnown RBP6.08□□□□□ -1.44
LINC00458-202ENST00000427299 FBXO34Q9NWN3 711 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 C14orf119Q9NWQ9 140 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 MOCS1Q9NZB8 636 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 SLC23A1Q9UHI7 598 aa6.08□□□□□ -1.44
LINC00458-202ENST00000427299 KIF16BQ96L93 1317 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 RAP2AP10114 183 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 PROK1P58294 105 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 MRPS9P82933 396 aaKnown RBP6.07□□□□□ -1.44
LINC00458-202ENST00000427299 MICALCLQ6ZW33 695 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 BHLHA9Q7RTU4 235 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 C1QL2Q7Z5L3 287 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 MORC1Q86VD1 984 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 SCARB1Q8WTV0 552 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 CHMP4CQ96CF2 233 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 RNF7Q9UBF6 113 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 ARPP21Q9UBL0 812 aaPredicted RBP6.07□□□□□ -1.44
LINC00458-202ENST00000427299 CACNA1FO60840 1977 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 CD109Q6YHK3 1445 aa6.07□□□□□ -1.44
LINC00458-202ENST00000427299 NALCNQ8IZF0 1738 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 APAF1O14727 1248 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 AKAP10O43572 662 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 ZFPL1O95159 310 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 IARSP41252 1262 aaKnown RBP6.06□□□□□ -1.44
LINC00458-202ENST00000427299 CCT2P78371 535 aaKnown RBP6.06□□□□□ -1.44
LINC00458-202ENST00000427299 PPP3CAQ08209 521 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 MUM1Q2TAK8 710 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 LCE1AQ5T7P2 110 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 ZNF529Q6P280 563 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 PQLC1Q8N2U9 271 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 C1orf162Q8NEQ5 155 aaPredicted RBP6.06□□□□□ -1.44
LINC00458-202ENST00000427299 STON2Q8WXE9 905 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 AUTS2Q8WXX7 1259 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 CAMKK2Q96RR4 588 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 UHRF1Q96T88 793 aaPredicted RBP6.06□□□□□ -1.44
LINC00458-202ENST00000427299 PNNQ9H307 717 aaKnown RBP6.06□□□□□ -1.44
LINC00458-202ENST00000427299 CHMP4BQ9H444 224 aaKnown RBP6.06□□□□□ -1.44
LINC00458-202ENST00000427299 GREM2Q9H772 168 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 TCF7L1Q9HCS4 588 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 LANCL2Q9NS86 450 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 DMTF1Q9Y222 760 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 PTPRMP28827 1452 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 TOPAZ1Q8N9V7 1692 aa6.06□□□□□ -1.44
LINC00458-202ENST00000427299 ADGRF5Q8IZF2 1346 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 C3P01024 1663 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 CDK12Q9NYV4 1490 aaPredicted RBP6.05□□□□□ -1.44
LINC00458-202ENST00000427299 SHTN1A0MZ66 631 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 ABLIM3O94929 683 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 FPR1P21462 350 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 ABCG1P45844 678 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 RAB27AP51159 221 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 ABCB5Q2M3G0 1257 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 L1TD1Q5T7N2 865 aaKnown RBP6.05□□□□□ -1.44
LINC00458-202ENST00000427299 C20orf194Q5TEA3 1177 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 FOXR2Q6PJQ5 311 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 FTSJ3Q8IY81 847 aaKnown RBP6.05□□□□□ -1.44
LINC00458-202ENST00000427299 CCDC146Q8IYE0 955 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 AFAP1Q8N556 730 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 CASKIN2Q8WXE0 1202 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 SMG7Q92540 1137 aaKnown RBP6.05□□□□□ -1.44
LINC00458-202ENST00000427299 FAXDC2Q96IV6 333 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 SMAD5Q99717 465 aaKnown RBP6.05□□□□□ -1.44
LINC00458-202ENST00000427299 C1QTNF7Q9BXJ2 289 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 KMT5AQ9NQR1 393 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 RBM12Q9NTZ6 932 aaKnown RBP6.05□□□□□ -1.44
LINC00458-202ENST00000427299 ASB6Q9NWX5 421 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 RIPOR2Q9Y4F9 1068 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 PPIP5K1Q6PFW1 1433 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 SPATA31D1Q6ZQQ2 1576 aa6.05□□□□□ -1.44
LINC00458-202ENST00000427299 CPS1P31327 1500 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 AGLP35573 1532 aa6.04□□□□□ -1.44
LINC00458-202ENST00000427299 ARHGEF40Q8TER5 1519 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms