RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 NCAPHQ15003 741 aa14.54□□□□□ -0.08
RPL28-202ENST00000426763 KDELC2Q7Z4H8 507 aa14.54□□□□□ -0.08
RPL28-202ENST00000426763 NT5DC4Q86YG4 428 aa14.54□□□□□ -0.08
RPL28-202ENST00000426763 WDR75Q8IWA0 830 aaKnown RBP14.54□□□□□ -0.08
RPL28-202ENST00000426763 CCDC60Q8IWA6 550 aaPredicted RBP14.54□□□□□ -0.08
RPL28-202ENST00000426763 ZFATQ9P243 1243 aa14.54□□□□□ -0.08
RPL28-202ENST00000426763 PAK5Q9P286 719 aa14.54□□□□□ -0.08
RPL28-202ENST00000426763 GSPT2Q8IYD1 628 aaKnown RBP14.53□□□□□ -0.08
RPL28-202ENST00000426763 SPATA18Q8TC71 538 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 HASPINQ8TF76 798 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 MAML1Q92585 1016 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 TRIM10Q9UDY6 481 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 DPP7Q9UHL4 492 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 CST8O60676 142 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 SLC12A3P55017 1021 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 SMTNL2Q2TAL5 461 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 MTMR14Q8NCE2 650 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 SDCCAG3Q96C92 435 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 MS4A14Q96JA4 679 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 DNAJC7Q99615 494 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 THAP2Q9H0W7 228 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 KRT82Q9NSB4 513 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 POMCP01189 267 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 AMHP03971 560 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 SLURP2P0DP57 97 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 RAP1GAPP47736 663 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 ULK4Q96C45 1275 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 DRC3Q9H069 523 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 LSM8O95777 96 aaKnown RBP14.53□□□□□ -0.08
RPL28-202ENST00000426763 ITIH2P19823 946 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 NCF2P19878 526 aaPredicted RBP14.53□□□□□ -0.08
RPL28-202ENST00000426763 ANKRD23Q86SG2 305 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 PORCNQ9H237 461 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 FAM96AQ9H5X1 160 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 INTS13Q9NVM9 706 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 CAPN7Q9Y6W3 813 aa14.53□□□□□ -0.08
RPL28-202ENST00000426763 CHD2O14647 1828 aaKnown RBP14.53□□□□□ -0.08
RPL28-202ENST00000426763 ZNF185O15231 689 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 CENPCQ03188 943 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 PTPN11Q06124 597 aaPredicted RBP14.52□□□□□ -0.08
RPL28-202ENST00000426763 TREML2Q5T2D2 321 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 C4orf22Q6V702 233 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 MAP4K3Q8IVH8 894 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 EGFL8Q99944 293 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 KCNF1Q9H3M0 494 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 BLOC1S4Q9NUP1 217 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 TRPM5Q9NZQ8 1165 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 SLIT2O94813 1529 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 DNAJC6O75061 913 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 OCRLQ01968 901 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 SDE2Q6IQ49 451 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 COPS5Q92905 334 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 ZBTB18Q99592 522 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.52□□□□□ -0.08
RPL28-202ENST00000426763 TPX2Q9ULW0 747 aaKnown RBP14.52□□□□□ -0.08
RPL28-202ENST00000426763 ADAMTSL3P82987 1691 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 AKAP5P24588 427 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 EPHB2P29323 1055 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 TYK2P29597 1187 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 NUGGCQ68CJ6 796 aa14.52□□□□□ -0.08
RPL28-202ENST00000426763 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.52□□□□□ -0.08
RPL28-202ENST00000426763 MAP3K7O43318 606 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 GZMAP12544 262 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 EPHB3P54753 998 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 IFT88Q13099 833 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 MDH1BQ5I0G3 518 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 TMC7Q7Z402 723 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 ILDR1Q86SU0 546 aaPredicted RBP14.52□□□□□ -0.09
RPL28-202ENST00000426763 BRSK2Q8IWQ3 736 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 PBXIP1Q96AQ6 731 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 G3BP2Q9UN86 482 aaKnown RBP14.52□□□□□ -0.09
RPL28-202ENST00000426763 PSTPIP1O43586 416 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 BAG2O95816 211 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 ATXN8OSP0DMR3 200 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 STAT4Q14765 748 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 CDKAL1Q5VV42 579 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 MTHFD1LQ6UB35 978 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 TMEM134Q9H6X4 195 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 EPS15L1Q9UBC2 864 aa14.52□□□□□ -0.09
RPL28-202ENST00000426763 SMAPO00193 183 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 MBL2P11226 248 aaPredicted RBP14.51□□□□□ -0.09
RPL28-202ENST00000426763 SATB1Q01826 763 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 BST2Q10589 180 aaKnown RBP14.51□□□□□ -0.09
RPL28-202ENST00000426763 CDH18Q13634 790 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 GTF2H3Q13889 308 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 OVOS1Q6IE37 1185 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 CXCL17Q6UXB2 119 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 DDX43Q9NXZ2 648 aaKnown RBP14.51□□□□□ -0.09
RPL28-202ENST00000426763 F8VZ95 297 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 ARHGEF7Q14155 803 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 BTG3Q14201 252 aaPredicted RBP14.51□□□□□ -0.09
RPL28-202ENST00000426763 PRAMEF19Q5SWL8 479 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 REM2Q8IYK8 340 aaPredicted RBP14.51□□□□□ -0.09
RPL28-202ENST00000426763 PGBD3Q8N328 593 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 GPATCH11Q8N954 259 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 LRRC1Q9BTT6 524 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 TRIM55Q9BYV6 548 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 PITPNM3Q9BZ71 974 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 SUN2Q9UH99 717 aa14.51□□□□□ -0.09
RPL28-202ENST00000426763 FBXL5Q9UKA1 691 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms