RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ACAD9Q9H845 621 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 NGRNQ9NPE2 291 aaKnown RBP14.11□□□□□ -0.15
USP42-203ENST00000426246 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.11□□□□□ -0.15
USP42-203ENST00000426246 SUFUQ9UMX1 484 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 NR2E3Q9Y5X4 410 aa14.11□□□□□ -0.15
USP42-203ENST00000426246 CST8O60676 142 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 BAG2O95816 211 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 ATP5DP30049 168 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 MMP13P45452 471 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 MKRN3Q13064 507 aaKnown RBP14.1□□□□□ -0.15
USP42-203ENST00000426246 NCOA4Q13772 614 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 MIS18BP1Q6P0N0 1132 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 LVRNQ6Q4G3 990 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 RHOT1Q8IXI2 618 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 HELQQ8TDG4 1101 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 ATXN2LQ8WWM7 1075 aaKnown RBP14.1□□□□□ -0.15
USP42-203ENST00000426246 ATP6V0A1Q93050 837 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 LRRC37BQ96QE4 947 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 MAK16Q9BXY0 300 aaKnown RBP14.1□□□□□ -0.15
USP42-203ENST00000426246 ADAM7Q9H2U9 754 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 DMAC2Q9NW81 257 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 A0A1B0GUA9 196 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 AVILO75366 819 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 SAT1P21673 171 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 MYL6P60660 151 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 TFDP1Q14186 410 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 XRRA1Q6P2D8 792 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 ANKS1BQ7Z6G8 1248 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 FAM228AQ86W67 206 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 LONP2Q86WA8 852 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 VPS52Q8N1B4 723 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 SPDL1Q96EA4 605 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 PPP1R36Q96LQ0 422 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 IWS1Q96ST2 819 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 DCLK3Q9C098 648 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 ARMCX1Q9P291 453 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 TTLL13PA6NNM8 815 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 NOP56O00567 594 aaKnown RBP14.1□□□□□ -0.15
USP42-203ENST00000426246 CXCL11O14625 94 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 CST3P01034 146 aaPredicted RBP14.1□□□□□ -0.15
USP42-203ENST00000426246 HSPA6P17066 643 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 NFX1Q12986 1120 aaKnown RBP14.1□□□□□ -0.15
USP42-203ENST00000426246 PPIL2Q13356 520 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 CLEC16AQ2KHT3 1053 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 C3orf62Q6ZUJ4 267 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 SESTD1Q86VW0 696 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 SUGP1Q8IWZ8 645 aaKnown RBP14.1□□□□□ -0.15
USP42-203ENST00000426246 RNF149Q8NC42 400 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 KCTD6Q8NC69 237 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 GRK7Q8WTQ7 553 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 SHC3Q92529 594 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 MCUR1Q96AQ8 359 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 RILPQ96NA2 401 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 TRAIPQ9BWF2 469 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 JPH1Q9HDC5 661 aaPredicted RBP14.1□□□□□ -0.15
USP42-203ENST00000426246 NUB1Q9Y5A7 615 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 NCANO14594 1321 aa14.1□□□□□ -0.15
USP42-203ENST00000426246 STAM2O75886 525 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 F7P08709 466 aaPredicted RBP14.09□□□□□ -0.15
USP42-203ENST00000426246 GPR162Q16538 588 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 TDRD10Q5VZ19 366 aaKnown RBP14.09□□□□□ -0.15
USP42-203ENST00000426246 APBB1IPQ7Z5R6 666 aaPredicted RBP14.09□□□□□ -0.15
USP42-203ENST00000426246 PPM1NQ8N819 430 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 ZNF516Q92618 1163 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 NQO1P15559 274 aaKnown RBP14.09□□□□□ -0.15
USP42-203ENST00000426246 KCNA2P16389 499 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 EPHB2P29323 1055 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 ALDH3A1P30838 453 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 RAD23BP54727 409 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 ACTR2P61160 394 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 AMHR2Q16671 573 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 C6orf89Q6UWU4 347 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 ZNF526Q8TF50 670 aaPredicted RBP14.09□□□□□ -0.15
USP42-203ENST00000426246 TLCD1Q96CP7 247 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 TBC1D22BQ9NU19 505 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 PHTF1Q9UMS5 762 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 PCDHB2Q9Y5E7 798 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 PTPRJQ12913 1337 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 ENTPD5O75356 428 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 RASSF9O75901 435 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 CPP00450 1065 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 ADRA1DP25100 572 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 FOXN2P32314 431 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 TAF5Q15542 800 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 RIOX2Q8IUF8 465 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 OPTNQ96CV9 577 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 ZNF317Q96PQ6 595 aaPredicted RBP14.09□□□□□ -0.15
USP42-203ENST00000426246 TRIM56Q9BRZ2 755 aaKnown RBP14.09□□□□□ -0.15
USP42-203ENST00000426246 CEP41Q9BYV8 373 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 ASCC2Q9H1I8 757 aaPredicted RBP14.09□□□□□ -0.15
USP42-203ENST00000426246 ATP6V0A4Q9HBG4 840 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 TXNRD2Q9NNW7 524 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 ARL2BPQ9Y2Y0 163 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 TTLL3Q9Y4R7 772 aa14.09□□□□□ -0.15
USP42-203ENST00000426246 BTNL10A8MVZ5 291 aa14.08□□□□□ -0.15
USP42-203ENST00000426246 CDH16O75309 829 aa14.08□□□□□ -0.15
USP42-203ENST00000426246 ITIH2P19823 946 aa14.08□□□□□ -0.15
USP42-203ENST00000426246 SLC8A1P32418 973 aa14.08□□□□□ -0.15
USP42-203ENST00000426246 COPS2P61201 443 aa14.08□□□□□ -0.15
USP42-203ENST00000426246 ALCAMQ13740 583 aa14.08□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms