RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 PEX3P56589 373 aa15.42■□□□□ 0.06
HDAC6-206ENST00000426196 SCRN1Q12765 414 aa15.42■□□□□ 0.06
HDAC6-206ENST00000426196 DMP1Q13316 513 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-206ENST00000426196 PDGFRLQ15198 375 aa15.42■□□□□ 0.06
HDAC6-206ENST00000426196 SOWAHCQ53LP3 525 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-206ENST00000426196 CPA6Q8N4T0 437 aa15.42■□□□□ 0.06
HDAC6-206ENST00000426196 CCDC26Q8TAB7 109 aa15.42■□□□□ 0.06
HDAC6-206ENST00000426196 SEPT5Q99719 369 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-206ENST00000426196 LPIN3Q9BQK8 851 aa15.42■□□□□ 0.06
HDAC6-206ENST00000426196 TPSD1Q9BZJ3 242 aa15.42■□□□□ 0.06
HDAC6-206ENST00000426196 IL21Q9HBE4 155 aa15.42■□□□□ 0.06
HDAC6-206ENST00000426196 ORC3Q9UBD5 711 aaPredicted RBP15.42■□□□□ 0.06
HDAC6-206ENST00000426196 TNRC6BQ9UPQ9 1833 aaKnown RBP15.42■□□□□ 0.06
HDAC6-206ENST00000426196 ASXL3Q9C0F0 2248 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 TSC2P49815 1807 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 SPAARA0A1B0GVQ0 90 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 WNT7AO00755 349 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 REC8O95072 547 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 LARGE1O95461 756 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 SEC24BO95487 1268 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 TYMPP19971 482 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 MUTP22033 750 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 DDX6P26196 483 aaKnown RBP eCLIP15.41■□□□□ 0.06
HDAC6-206ENST00000426196 U2AF2P26368 475 aaKnown RBP eCLIP15.41■□□□□ 0.06
HDAC6-206ENST00000426196 MAPK8P45983 427 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 NPTX2P47972 431 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 NOLC1Q14978 699 aaKnown RBP eCLIP15.41■□□□□ 0.06
HDAC6-206ENST00000426196 MGAT5BQ3V5L5 792 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 TRIM61Q5EBN2 209 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 HAUS3Q68CZ6 603 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 PDZD3Q86UT5 571 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 CD101Q93033 1021 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 TMEM60Q9H2L4 133 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 BHMT2Q9H2M3 363 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 TDP1Q9NUW8 608 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 ARHGAP28Q9P2N2 729 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 ANKFY1Q9P2R3 1169 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 TBX20Q9UMR3 447 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 CCL26Q9Y258 94 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 GPSM3Q9Y4H4 160 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 ADAMTS9Q9P2N4 1935 aa15.41■□□□□ 0.06
HDAC6-206ENST00000426196 ABLIM1O14639 778 aa15.4■□□□□ 0.06
HDAC6-206ENST00000426196 ODC1P11926 461 aa15.4■□□□□ 0.06
HDAC6-206ENST00000426196 BCKDHBP21953 392 aa15.4■□□□□ 0.06
HDAC6-206ENST00000426196 LRPAP1P30533 357 aa15.4■□□□□ 0.06
HDAC6-206ENST00000426196 MCM7P33993 719 aa15.4■□□□□ 0.06
HDAC6-206ENST00000426196 GJA4P35212 333 aa15.4■□□□□ 0.06
HDAC6-206ENST00000426196 IRX6P78412 446 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-206ENST00000426196 SLC10A6Q3KNW5 377 aa15.4■□□□□ 0.06
HDAC6-206ENST00000426196 ANO7Q6IWH7 933 aa15.4■□□□□ 0.06
HDAC6-206ENST00000426196 C19orf48Q6RUI8 117 aa15.4■□□□□ 0.06
HDAC6-206ENST00000426196 MAB21L3Q8N8X9 362 aa15.4■□□□□ 0.06
HDAC6-206ENST00000426196 USP13Q92995 863 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-206ENST00000426196 CNOT6LQ96LI5 555 aaKnown RBP15.4■□□□□ 0.06
HDAC6-206ENST00000426196 KMT5AQ9NQR1 393 aa15.4■□□□□ 0.06
HDAC6-206ENST00000426196 UBQLN1Q9UMX0 589 aaKnown RBP15.4■□□□□ 0.06
HDAC6-206ENST00000426196 RBM19Q9Y4C8 960 aaKnown RBP15.4■□□□□ 0.06
HDAC6-206ENST00000426196 TCHHQ07283 1943 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 CEP192Q8TEP8 1941 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 XPOTO43592 962 aaKnown RBP15.39■□□□□ 0.05
HDAC6-206ENST00000426196 CXCL8P10145 99 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 ATF6P18850 670 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 DPP6P42658 865 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 ATXN3P54252 364 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-206ENST00000426196 SLC39A12Q504Y0 691 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 SEZ6Q53EL9 994 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 NAIF1Q69YI7 327 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-206ENST00000426196 TAS1R3Q7RTX0 852 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 PIP4P1Q86T03 277 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 SKAP1Q86WV1 359 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 HDDC3Q8N4P3 179 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 SPACA7Q96KW9 195 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 ECT2Q9H8V3 914 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 PLEKHA5Q9HAU0 1116 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 PLXND1Q9Y4D7 1925 aa15.39■□□□□ 0.05
HDAC6-206ENST00000426196 FAM221BA6H8Z2 402 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 EIF4E1BA6NMX2 242 aaKnown RBP15.38■□□□□ 0.05
HDAC6-206ENST00000426196 UPK3BL1B0FP48 263 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 BTBD18B2RXH4 712 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 UPK3BL2E5RIL1 263 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 DTNBO60941 627 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 TOM1L1O75674 476 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 ENGP17813 658 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 CYP3A5P20815 502 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 CCT6AP40227 531 aaKnown RBP15.38■□□□□ 0.05
HDAC6-206ENST00000426196 MATR3P43243 847 aaKnown RBP eCLIP15.38■□□□□ 0.05
HDAC6-206ENST00000426196 SPAG1Q07617 926 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 STRN3Q13033 797 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 SEMA3BQ13214 749 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 ZNF268Q14587 947 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-206ENST00000426196 ZNF423Q2M1K9 1284 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 LMBRD2Q68DH5 695 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-206ENST00000426196 LPCAT2Q7L5N7 544 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 RASSF3Q86WH2 238 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 SYT12Q8IV01 421 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 DIS3L2Q8IYB7 885 aaKnown RBP15.38■□□□□ 0.05
HDAC6-206ENST00000426196 TMEM130Q8N3G9 435 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 GIPC2Q8TF65 315 aa15.38■□□□□ 0.05
HDAC6-206ENST00000426196 MRPS31Q92665 395 aaKnown RBP15.38■□□□□ 0.05
HDAC6-206ENST00000426196 EZH1Q92800 747 aaPredicted RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms