RNA–Protein interactions for RNA: ENST00000424880.2

SEC61A1-202, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene SEC61A1, Length 3,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-202ENST00000424880 HSPA6P17066 643 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 MSX2P35548 267 aaPredicted RBP11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 PSMC2P35998 433 aaKnown RBP11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 IRX4P78413 519 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 PLCB3Q01970 1234 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 ZFPM1Q8IX07 1006 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 SETDB2Q96T68 719 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 TMEM117Q9H0C3 514 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 WNT8AQ9H1J5 351 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 RANBP17Q9H2T7 1088 aaKnown RBP11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 PCDH18Q9HCL0 1135 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 IL1RAPL1Q9NZN1 696 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 ANGPTL2Q9UKU9 493 aa11.88□□□□□ -0.51
SEC61A1-202ENST00000424880 FRMPD4Q14CM0 1322 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 EMSYQ7Z589 1322 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 CAPN8A6NHC0 703 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 USP17L10C9JJH3 530 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 VILLO15195 856 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 ZWINTO95229 277 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 ANXA13P27216 316 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 SERPINB6P35237 376 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 CDK8P49336 464 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 NRLP54845 237 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 PDE1BQ01064 536 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 MSLNQ13421 630 aaPredicted RBP11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 TRIP10Q15642 601 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 TCHHL1Q5QJ38 904 aaPredicted RBP11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 KLHDC10Q6PID8 442 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 METTL25Q8N6Q8 603 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 DCLK3Q9C098 648 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 SAR1AQ9NR31 198 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 TUBGCP4Q9UGJ1 667 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 ZNF180Q9UJW8 692 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 LAMB2P55268 1798 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 DLEC1Q9Y238 1755 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 GOLGA8IPA6NC78 632 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 GOLGA8JA6NMD2 632 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 POTEJP0CG39 1038 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 CDK4P11802 303 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 VCLP18206 1134 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 RNF168Q8IYW5 571 aaPredicted RBP11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 CPA5Q8WXQ8 436 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 OXNAD1Q96HP4 312 aaPredicted RBP11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 TSPAN18Q96SJ8 248 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 PSTPIP2Q9H939 334 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 ARAP2Q8WZ64 1704 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 ZNF804BA4D1E1 1349 aa11.87□□□□□ -0.51
SEC61A1-202ENST00000424880 ZMPSTE24O75844 475 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 ATF7P17544 494 aaPredicted RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 TM4SF1P30408 202 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 AP2B1P63010 937 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 GPS1Q13098 491 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 MFSD4BQ5TF39 518 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 C11orf63Q6NUN7 778 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 FAM196AQ6ZSG2 479 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 PRPF39Q86UA1 669 aaKnown RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 TPH2Q8IWU9 490 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 PSPC1Q8WXF1 523 aaKnown RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 RILPQ96NA2 401 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 OSBPL8Q9BZF1 889 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 USP29Q9HBJ7 922 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 ZNF148Q9UQR1 794 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 PRR5-ARHGAP8B1AHC4 643 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 VIL1P09327 827 aaKnown RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 PABPC4LP0CB38 370 aaKnown RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 SPATA31C1P0DKV0 1188 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 IDO1P14902 403 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 MAPK4P31152 587 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 ARHGAP8P85298 464 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 PPP3CAQ08209 521 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 PDK3Q15120 406 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 CLUL1Q15846 466 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 NADK2Q4G0N4 442 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 PPP6R3Q5H9R7 873 aaPredicted RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 ARID3BQ8IVW6 561 aaPredicted RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 ADGRF4Q8IZF3 695 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 NME8Q8N427 588 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 ZFP28Q8NHY6 868 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 CCDC110Q8TBZ0 833 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 PPP2R3CQ969Q6 453 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 SUN2Q9UH99 717 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 SCN7AQ01118 1682 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 BTBD19C9JJ37 291 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 CYB561D2O14569 222 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 E2F6O75461 281 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 DLDP09622 509 aaKnown RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 TCF4P15884 667 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 HOXA7P31268 230 aaPredicted RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 HIBADHP31937 336 aaKnown RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 CDK16Q00536 496 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 PICALMQ13492 652 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 BTG3Q14201 252 aaPredicted RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 SMAD1Q15797 465 aaKnown RBP11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 TSHZ1Q6ZSZ6 1077 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 CCDC127Q96BQ5 260 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 CNBD2Q96M20 576 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 ACAP3Q96P50 834 aa11.86□□□□□ -0.51
SEC61A1-202ENST00000424880 OLFM3Q96PB7 478 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms