RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 HMX1Q9NP08 348 aaPredicted RBP7.18□□□□□ -1.26
CNOT4-205ENST00000423368 SLC35C2Q9NQQ7 365 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ITM2CQ9NQX7 267 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 THAP1Q9NVV9 213 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 DNAJC28Q9NX36 388 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 PPARGC1AQ9UBK2 798 aaKnown RBP7.18□□□□□ -1.26
CNOT4-205ENST00000423368 REV1Q9UBZ9 1251 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 SLC7A8Q9UHI5 535 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ANAPC5Q9UJX4 755 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 UGT2A1Q9Y4X1 527 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 LRRC7Q96NW7 1537 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 MED23Q9ULK4 1368 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ARHGEF5Q12774 1597 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ZNF609O15014 1411 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 GOLGB1Q14789 3259 aaKnown RBP7.18□□□□□ -1.26
CNOT4-205ENST00000423368 LOC100653049A0A140TA62 436 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 TOR1BO14657 336 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 TSPAN4O14817 238 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ZW10O43264 779 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 KCNQ3O43525 872 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ITM2AO43736 263 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 LILRB3O75022 631 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 SIN3BO75182 1162 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 KRT34O76011 436 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 BMP10O95393 424 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 PRLP01236 227 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 RAG1P15918 1043 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 STAT3P40763 770 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 POLD2P49005 469 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 YARSP54577 528 aaKnown RBP7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ALDH18A1P54886 795 aaKnown RBP7.18□□□□□ -1.26
CNOT4-205ENST00000423368 RPS6P62753 249 aaKnown RBP7.18□□□□□ -1.26
CNOT4-205ENST00000423368 MRPS15P82914 257 aaKnown RBP7.18□□□□□ -1.26
CNOT4-205ENST00000423368 KLHL30Q0D2K2 578 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 TFCP2Q12800 502 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 CDONQ4KMG0 1287 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 FGD3Q5JSP0 725 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ANKRD40Q6AI12 368 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ATG14Q6ZNE5 492 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 C3orf62Q6ZUJ4 267 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 PTAR1Q7Z6K3 402 aaPredicted RBP7.18□□□□□ -1.26
CNOT4-205ENST00000423368 PDSS2Q86YH6 399 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 JAMLQ86YT9 394 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 HSPH1Q92598 858 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ALDH8A1Q9H2A2 487 aaPredicted RBP7.18□□□□□ -1.26
CNOT4-205ENST00000423368 CDC42EP4Q9H3Q1 356 aaKnown RBP7.18□□□□□ -1.26
CNOT4-205ENST00000423368 STN1Q9H668 368 aaKnown RBP7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ACP6Q9NPH0 428 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 ZNF229Q9UJW7 825 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 POLHQ9Y253 713 aa7.18□□□□□ -1.26
CNOT4-205ENST00000423368 GON4LQ3T8J9 2241 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 FLT1P17948 1338 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 WDR17Q8IZU2 1322 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 MYOM1P52179 1685 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 TRIM75PA6NK02 468 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 ZBBXA8MT70 800 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 ZMPSTE24O75844 475 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 ASNSP08243 561 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 PLCG1P19174 1290 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 JAK1P23458 1154 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 RPA3P35244 121 aaPredicted RBP7.17□□□□□ -1.26
CNOT4-205ENST00000423368 GNA13Q14344 377 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 C10orf76Q5T2E6 689 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 RSBN1LQ6PCB5 846 aaPredicted RBP7.17□□□□□ -1.26
CNOT4-205ENST00000423368 DHDDSQ86SQ9 333 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 COL23A1Q86Y22 540 aaPredicted RBP7.17□□□□□ -1.26
CNOT4-205ENST00000423368 CROCCP3Q8IVE0 287 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 NELFCDQ8IXH7 590 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 GLIS3Q8NEA6 775 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 SEC14L1Q92503 715 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 TCF12Q99081 682 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 CDH19Q9H159 772 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 TUFT1Q9NNX1 390 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 STRN4Q9NRL3 753 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 USP40Q9NVE5 1235 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 NCKIPSDQ9NZQ3 722 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 ZSWIM5Q9P217 1185 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 RABGEF1Q9UJ41 708 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 PRR12Q9ULL5 1215 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 SLC8A2Q9UPR5 921 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 ERVK-11Q9UQG0 969 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 FGFR1P11362 822 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 KRT4P19013 534 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 CRABP2P29373 138 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 RAP1GDS1P52306 607 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 IL1RL1Q01638 556 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 SSRP1Q08945 709 aaKnown RBP7.17□□□□□ -1.26
CNOT4-205ENST00000423368 CTTNQ14247 550 aaKnown RBP7.17□□□□□ -1.26
CNOT4-205ENST00000423368 SF3B3Q15393 1217 aaKnown RBP7.17□□□□□ -1.26
CNOT4-205ENST00000423368 DLG2Q15700 870 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 RALGPS1Q5JS13 557 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 HABP4Q5JVS0 413 aaKnown RBP7.17□□□□□ -1.26
CNOT4-205ENST00000423368 TMEM164Q5U3C3 297 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 GPR107Q5VW38 600 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 GALNT18Q6P9A2 607 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 RNF111Q6ZNA4 994 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 RSPH3Q86UC2 560 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 ELMOD1Q8N336 334 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 SLC15A4Q8N697 577 aa7.17□□□□□ -1.26
CNOT4-205ENST00000423368 ALLCQ8N6M5 410 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms