RNA–Protein interactions for RNA: ENST00000422770.5

HERC3-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-204ENST00000422770 YIPF1Q9Y548 306 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 MYO10Q9HD67 2058 aa10.37□□□□□ -0.75
HERC3-204ENST00000422770 XIRP2A4UGR9 3374 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 BICDL2A1A5D9 508 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 MTMR11A4FU01 709 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 C19orf67A6NJJ6 358 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 LOC730098B7Z3J9 87 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 HCRTO43612 131 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 CST3P01034 146 aaPredicted RBP10.36□□□□□ -0.75
HERC3-204ENST00000422770 ASGR2P07307 311 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 PDGFRBP09619 1106 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 MYL4P12829 197 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 CCNE1P24864 410 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 PCSK1P29120 753 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 HOXA9P31269 272 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 PPP1R2P41236 205 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 LHX1P48742 406 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 ZNF165P49910 485 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 PMS1P54277 932 aaKnown RBP10.36□□□□□ -0.75
HERC3-204ENST00000422770 EPHB3P54753 998 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 PSMC1P62191 440 aaKnown RBP10.36□□□□□ -0.75
HERC3-204ENST00000422770 LRRC63Q05C16 580 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 GPR17Q13304 367 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 PLD1Q13393 1074 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 NFIL3Q16649 462 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 ZCWPW2Q504Y3 356 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 CYP26C1Q6V0L0 522 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 OSTM1Q86WC4 334 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 GAS2L3Q86XJ1 694 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 TTC9BQ8N6N2 239 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 TOP6BLQ8N6T0 577 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 CCDC150Q8NCX0 1101 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 ST13P5Q8NFI4 369 aaPredicted RBP10.36□□□□□ -0.75
HERC3-204ENST00000422770 OR6B3Q8NGW1 331 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 KHSRPQ92945 711 aaKnown RBP eCLIP10.36□□□□□ -0.75
HERC3-204ENST00000422770 BORCS6Q96GS4 357 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 DHTKD1Q96HY7 919 aaPredicted RBP10.36□□□□□ -0.75
HERC3-204ENST00000422770 ZNF512Q96ME7 567 aaPredicted RBP10.36□□□□□ -0.75
HERC3-204ENST00000422770 PI4K2AQ9BTU6 479 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 ZCWPW1Q9H0M4 648 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 GDAP2Q9NXN4 497 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 LIMD1Q9UGP4 676 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 MRPS23Q9Y3D9 190 aaKnown RBP10.36□□□□□ -0.75
HERC3-204ENST00000422770 PCDHB5Q9Y5E4 795 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 DOCK8Q8NF50 2099 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 PTPRDP23468 1912 aa10.36□□□□□ -0.75
HERC3-204ENST00000422770 NOTCH4Q99466 2003 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 FAM86C2PA6NEL3 165 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 GOLGA6L3A6NEY3 463 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 BECN2A8MW95 431 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 DCXO43602 365 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 HLA-DRAP01903 254 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 RHOP08100 348 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 P4HA1P13674 534 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 PTPN2P17706 415 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 ATICP31939 592 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 RAP1GAPP47736 663 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 FKBP3Q00688 224 aaKnown RBP10.35□□□□□ -0.75
HERC3-204ENST00000422770 MYL5Q02045 173 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 CYP27A1Q02318 531 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 VEPH1Q14D04 833 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 TPD52L1Q16890 204 aaPredicted RBP10.35□□□□□ -0.75
HERC3-204ENST00000422770 SOWAHAQ2M3V2 549 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 INTS6LQ5JSJ4 861 aaKnown RBP10.35□□□□□ -0.75
HERC3-204ENST00000422770 CYP4A22Q5TCH4 519 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 SPOPLQ6IQ16 392 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 PDZD4Q76G19 769 aaPredicted RBP10.35□□□□□ -0.75
HERC3-204ENST00000422770 LUZP1Q86V48 1076 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 SPATA2LQ8IUW3 424 aaPredicted RBP10.35□□□□□ -0.75
HERC3-204ENST00000422770 PLCD3Q8N3E9 789 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 CXorf38Q8TB03 319 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 MYADMQ96S97 322 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 RTP3Q9BQQ7 232 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 SYT15Q9BQS2 421 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 MRPL45Q9BRJ2 306 aaKnown RBP10.35□□□□□ -0.75
HERC3-204ENST00000422770 RBSNQ9H1K0 784 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 SLITRK6Q9H5Y7 841 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 EPHX3Q9H6B9 360 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 SMYD3Q9H7B4 428 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 ASAH2Q9NR71 780 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 DNMT3BQ9UBC3 853 aaKnown RBP10.35□□□□□ -0.75
HERC3-204ENST00000422770 OBSL1O75147 1896 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 MYO16Q9Y6X6 1858 aa10.35□□□□□ -0.75
HERC3-204ENST00000422770 C5orf42Q9H799 3197 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 A8MXQ7 604 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 PPP1R3GB7ZBB8 358 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 GOLGA6L19H0YKK7 550 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 MAPK13O15264 365 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 SLC16A3O15427 465 aaKnown RBP10.34□□□□□ -0.75
HERC3-204ENST00000422770 STX10O60499 249 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 ATP2C2O75185 946 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 VNN1O95497 513 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 C4BPAP04003 597 aaKnown RBP10.34□□□□□ -0.75
HERC3-204ENST00000422770 ALADP13716 330 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 GNL1P36915 607 aaPredicted RBP10.34□□□□□ -0.75
HERC3-204ENST00000422770 MXI1P50539 228 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 TPM4P67936 248 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 NFE2Q16621 373 aaPredicted RBP10.34□□□□□ -0.75
HERC3-204ENST00000422770 CCDC142Q17RM4 750 aa10.34□□□□□ -0.75
HERC3-204ENST00000422770 SGSM1Q2NKQ1 1148 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms