RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 RAP1GAPP47736 663 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 FMO5P49326 533 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 CDH8P55286 799 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 NOP14P78316 857 aaKnown RBP16.86■□□□□ 0.29
BRAT1-202ENST00000421712 DUSP4Q13115 394 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 CBX2Q14781 532 aaPredicted RBP16.86■□□□□ 0.29
BRAT1-202ENST00000421712 SKOR2Q2VWA4 1001 aaPredicted RBP16.86■□□□□ 0.29
BRAT1-202ENST00000421712 HSP90AA4PQ58FG1 418 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 GPR149Q86SP6 731 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 OSTM1Q86WC4 334 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 ATAD1Q8NBU5 361 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 SEMA4DQ92854 862 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 CNOT6LQ96LI5 555 aaKnown RBP16.86■□□□□ 0.29
BRAT1-202ENST00000421712 MED15Q96RN5 788 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 PRKD2Q9BZL6 878 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 THAP9Q9H5L6 903 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 SMYD3Q9H7B4 428 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 ABI2Q9NYB9 513 aaPredicted RBP16.86■□□□□ 0.29
BRAT1-202ENST00000421712 CDH22Q9UJ99 828 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 SLC27A5Q9Y2P5 690 aa16.86■□□□□ 0.29
BRAT1-202ENST00000421712 A8MXQ7 604 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 GABRDO14764 452 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 HCRTO43612 131 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 XYLBO75191 536 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 TACC1O75410 805 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 FAM163BP0C2L3 166 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 MCCD1P59942 119 aaPredicted RBP16.85■□□□□ 0.29
BRAT1-202ENST00000421712 TYRO3Q06418 890 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 KCNH2Q12809 1159 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 SMAD2Q15796 467 aaKnown RBP16.85■□□□□ 0.29
BRAT1-202ENST00000421712 MGAT5BQ3V5L5 792 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 INTS6LQ5JSJ4 861 aaKnown RBP16.85■□□□□ 0.29
BRAT1-202ENST00000421712 RTL10Q7L3V2 364 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 LRRTM3Q86VH5 581 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 TRIM59Q8IWR1 403 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 TCEAL8Q8IYN2 117 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 CMASQ8NFW8 434 aaPredicted RBP16.85■□□□□ 0.29
BRAT1-202ENST00000421712 KBTBD7Q8WVZ9 684 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 NECTIN4Q96NY8 510 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 SYT15Q9BQS2 421 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 GTF3C4Q9UKN8 822 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 CDH9Q9ULB4 789 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 MAFFQ9ULX9 164 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 XIRP2A4UGR9 3374 aa16.85■□□□□ 0.29
BRAT1-202ENST00000421712 MTMR11A4FU01 709 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 LRRN2O75325 713 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 AFPP02771 609 aaKnown RBP16.84■□□□□ 0.29
BRAT1-202ENST00000421712 HNRNPA1P09651 372 aaKnown RBP eCLIP16.84■□□□□ 0.29
BRAT1-202ENST00000421712 ALDH1A3P47895 512 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 MARSP56192 900 aaKnown RBP16.84■□□□□ 0.29
BRAT1-202ENST00000421712 PSMC1P62191 440 aaKnown RBP16.84■□□□□ 0.29
BRAT1-202ENST00000421712 TWF1Q12792 350 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 SMARCB1Q12824 385 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 NFE2Q16621 373 aaPredicted RBP16.84■□□□□ 0.29
BRAT1-202ENST00000421712 CYP26C1Q6V0L0 522 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 C11orf57Q6ZUT1 292 aaPredicted RBP16.84■□□□□ 0.29
BRAT1-202ENST00000421712 LIMS2Q7Z4I7 341 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 ELMOD1Q8N336 334 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 FEZF2Q8TBJ5 459 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 ENOX1Q8TC92 643 aaKnown RBP16.84■□□□□ 0.29
BRAT1-202ENST00000421712 SUSD6Q92537 303 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 SEPT5Q99719 369 aaPredicted RBP16.84■□□□□ 0.29
BRAT1-202ENST00000421712 NAT10Q9H0A0 1025 aaKnown RBP16.84■□□□□ 0.29
BRAT1-202ENST00000421712 DNAJC25Q9H1X3 360 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 NFE2L3Q9Y4A8 694 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 PCDHB5Q9Y5E4 795 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 INSL5Q9Y5Q6 135 aa16.84■□□□□ 0.29
BRAT1-202ENST00000421712 ATP2C2O75185 946 aa16.83■□□□□ 0.28
BRAT1-202ENST00000421712 SP100P23497 879 aaPredicted RBP16.83■□□□□ 0.28
BRAT1-202ENST00000421712 HOXA9P31269 272 aa16.83■□□□□ 0.28
BRAT1-202ENST00000421712 TUFMP49411 452 aaKnown RBP16.83■□□□□ 0.28
BRAT1-202ENST00000421712 TSC2P49815 1807 aa16.83■□□□□ 0.28
BRAT1-202ENST00000421712 LRMPQ12912 555 aa16.83■□□□□ 0.28
BRAT1-202ENST00000421712 GRASPQ7Z6J2 395 aaPredicted RBP16.83■□□□□ 0.28
BRAT1-202ENST00000421712 SPATA2LQ8IUW3 424 aaPredicted RBP16.83■□□□□ 0.28
BRAT1-202ENST00000421712 FAM200AQ8TCP9 573 aa16.83■□□□□ 0.28
BRAT1-202ENST00000421712 SPPL2BQ8TCT7 592 aa16.83■□□□□ 0.28
BRAT1-202ENST00000421712 ADAMTS19Q8TE59 1207 aa16.83■□□□□ 0.28
BRAT1-202ENST00000421712 C2orf15Q8WU43 125 aaKnown RBP16.83■□□□□ 0.28
BRAT1-202ENST00000421712 RPGRIP1Q96KN7 1286 aa16.83■□□□□ 0.28
BRAT1-202ENST00000421712 NIF3L1Q9GZT8 377 aa16.83■□□□□ 0.28
BRAT1-202ENST00000421712 POMKQ9H5K3 350 aa16.83■□□□□ 0.28
BRAT1-202ENST00000421712 APOBEC3GQ9HC16 384 aaKnown RBP16.83■□□□□ 0.28
BRAT1-202ENST00000421712 TMLHEQ9NVH6 421 aa16.83■□□□□ 0.28
BRAT1-202ENST00000421712 SYCE3A1L190 88 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 MYBPHLA2RUH7 354 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 PES1O00541 588 aaKnown RBP16.82■□□□□ 0.28
BRAT1-202ENST00000421712 PRKCSHP14314 528 aaPredicted RBP16.82■□□□□ 0.28
BRAT1-202ENST00000421712 CD58P19256 250 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 TRIM21P19474 475 aaKnown RBP16.82■□□□□ 0.28
BRAT1-202ENST00000421712 EPHB3P54753 998 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 CYP27A1Q02318 531 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 PLD1Q13393 1074 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 MAPRE1Q15691 268 aaKnown RBP16.82■□□□□ 0.28
BRAT1-202ENST00000421712 IQCEQ6IPM2 695 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 IRF2BP1Q8IU81 584 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 TATDN2Q93075 761 aa16.82■□□□□ 0.28
BRAT1-202ENST00000421712 ZNF707Q96C28 371 aaPredicted RBP16.82■□□□□ 0.28
BRAT1-202ENST00000421712 ZNF512Q96ME7 567 aaPredicted RBP16.82■□□□□ 0.28
BRAT1-202ENST00000421712 PHF7Q9BWX1 381 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms