RNA–Protein interactions for RNA: ENST00000421085.6

CLCN4-203, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 6,534 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-203ENST00000421085 TERB1Q8NA31 727 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 GCNAQ96QF7 691 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 SENP2Q9HC62 589 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 NAGPAQ9UK23 515 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 ADGRA3Q8IWK6 1321 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 PRR36Q9H6K5 1346 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 ARHGEF5Q12774 1597 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 AQP5P55064 265 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 ATG9AQ7Z3C6 839 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 TNIP2Q8NFZ5 429 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 NEDD1Q8NHV4 660 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 GANCQ8TET4 914 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 OPTNQ96CV9 577 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 IL25Q9H293 177 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 CDC42EP4Q9H3Q1 356 aaKnown RBP12.87□□□□□ -0.35
CLCN4-203ENST00000421085 PCDHB2Q9Y5E7 798 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 CYTH3O43739 400 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 SASH3O75995 380 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 ATP1A4Q13733 1029 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 BTBD8Q5XKL5 378 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 KRT35Q92764 455 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 PACSIN1Q9BY11 444 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 CD274Q9NZQ7 290 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 GSNP06396 782 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 EFHC1Q5JVL4 640 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 TRIM69Q86WT6 500 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 FEZF2Q8TBJ5 459 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 ANKRD27Q96NW4 1050 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 RNF146Q9NTX7 359 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 DDX18Q9NVP1 670 aaKnown RBP12.87□□□□□ -0.35
CLCN4-203ENST00000421085 PCDHA10Q9Y5I2 948 aa12.87□□□□□ -0.35
CLCN4-203ENST00000421085 FBXW4P57775 412 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 KRR1Q13601 381 aaKnown RBP12.86□□□□□ -0.35
CLCN4-203ENST00000421085 HDDC2Q7Z4H3 204 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 EFCAB1Q9HAE3 211 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 WHRNQ9P202 907 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 ANKARQ7Z5J8 1434 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 ZNF839A8K0R7 811 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 FKBP6O75344 327 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 MYL3P08590 195 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 IMPDH2P12268 514 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 DMPKQ09013 629 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 LPCAT2Q7L5N7 544 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 ACTRT1Q8TDG2 376 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 DIS3LQ8TF46 1054 aaKnown RBP12.86□□□□□ -0.35
CLCN4-203ENST00000421085 ECSITQ9BQ95 431 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 ARIH2O95376 493 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 EIF2B2P49770 351 aaKnown RBP12.86□□□□□ -0.35
CLCN4-203ENST00000421085 CACNB2Q08289 660 aaPredicted RBP12.86□□□□□ -0.35
CLCN4-203ENST00000421085 WASHC2DQ5SRD0 308 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 FBXO36Q8NEA4 188 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 COQ7Q99807 217 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 APPL1Q9UKG1 709 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 ITM2BQ9Y287 266 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 TSC22D2O75157 780 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 LAMC2Q13753 1193 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 PKN3Q6P5Z2 889 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 FUCA2Q9BTY2 467 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 LACRTQ9GZZ8 138 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 TDRD3Q9H7E2 651 aaKnown RBP12.86□□□□□ -0.35
CLCN4-203ENST00000421085 CD209Q9NNX6 404 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 METTL5Q9NRN9 209 aaKnown RBP12.86□□□□□ -0.35
CLCN4-203ENST00000421085 EEF2KO00418 725 aaKnown RBP12.86□□□□□ -0.35
CLCN4-203ENST00000421085 PCSK7Q16549 785 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 ATPAF2Q8N5M1 289 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 SLC25A41Q8N5S1 370 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 FBXO25Q8TCJ0 367 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 SGF29Q96ES7 293 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 HPS4Q9NQG7 708 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 REREQ9P2R6 1566 aa12.86□□□□□ -0.35
CLCN4-203ENST00000421085 NDUFS3O75489 264 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 CENPPQ6IPU0 288 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 ZNF669Q96BR6 464 aaPredicted RBP12.85□□□□□ -0.35
CLCN4-203ENST00000421085 HES6Q96HZ4 224 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 CATSPER2Q96P56 530 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 MPP6Q9NZW5 540 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 SOX6P35712 828 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 KBTBD12Q3ZCT8 623 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 SNX30Q5VWJ9 437 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 PLEKHA8Q96JA3 519 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 PI4K2AQ9BTU6 479 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 TIPINQ9BVW5 301 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 H2AFY2Q9P0M6 372 aaPredicted RBP12.85□□□□□ -0.35
CLCN4-203ENST00000421085 DAPK2Q9UIK4 370 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 NCAPD2Q15021 1401 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 KIAA0391O15091 583 aaKnown RBP12.85□□□□□ -0.35
CLCN4-203ENST00000421085 GLRA3O75311 464 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 TPP2P29144 1249 aaPredicted RBP12.85□□□□□ -0.35
CLCN4-203ENST00000421085 SERPINB8P50452 374 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 SLC34A1Q06495 639 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 C12orf60Q5U649 245 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 RNF149Q8NC42 400 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 BTN2A2Q8WVV5 523 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 AGAP1Q9UPQ3 857 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 DNAJC16Q9Y2G8 782 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 DYTNA2CJ06 578 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 FAM58BPP0C7Q3 252 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 PYGMP11217 842 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 C16orf72Q14CZ0 275 aa12.85□□□□□ -0.35
CLCN4-203ENST00000421085 SGSM1Q2NKQ1 1148 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms